Protein

View in Explore
Genbank accession
XAO16659.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDSGNIIDLGIAKGGQVDGDVTINGKLTLNGAYVQTLAGINTTGGINSGAAISATTYYARSGSFYARAPDANANTHIWFENNNGIERGVIWAVPNTSDLGQVKIRAKTTGGVFAGEYSFRSDGQFEVPVAVKIGGAAMLTKDGNITSGSLFGGNLNNYLNTIKNDIVTGDNKKVSKTGDTMSGNLTINANLKVENSNGTFVDLGSENSDKNSRLTLARKIGDGAGVAMLKVTPEGNVQFGYQPTVATPSPTKYILIKSNGLEVEGDLVFKQTYRGVEEAVDITNQTIDLNSLIIRGSDLGTRKLYKCRSSGGGSNILNKPTSDGNFTLEVLSLRKVSDTDWSCKQTFTTKNNNVVGVYVRYGQVGSWTEWKEVVAGVQPINLGGTGATSVAAARNNLGVGEGQTVTFGNLVTNNLNANGQVKIGRTGDALRIWNAEYGAIFRRSETALHIIPTPKDAGESGGISNLRPLSIGLNNGMVQMRHSVELGDDGAGGNMITVDNDSKNVVITSNARLSPNFRMQLGQASYIDAECTTSVRPAGAGSFASQNNENVRAPLYMNIDRTDNSTYVPILKQRYVQGNSCYSLGTLINNGDFRLHYHEGGDGSSTGAVIKDISWEFKRNGDFYSPGRLRTANVYIGTDGNITGGSGNFANLNTTLNRKVNVGGWAGSSYGGWYKFATVTIPQGTGTVTFKISGGAGFNFKRYSQASIAEIVLRTGNNNPKGINAVLWNRSDLSFNQIATMNTSGDTYDVYVFCDGYTNALVVEYSCSENSSVTVVGLNGGIQPAVDALPEGHVVGKTVRLLNNIGGTFAAGESDIVTRGEYVTDNQKGMRIKSNGNNIGSNAAILRNDGRSFYILATDKNTAEKSDAANGDWNSLRPFTISMTTGEVSMNNGITVRNYATFYNDIVLKDNGYIHFNKSGNNPRNMSIFHAGDATRGNRIEIADDSSYLVYFQRLPGGANQCTFNSAALSGITQTNSFGVNTSNALGGNSITFGDNDTGIKQNGDGLLDIYTNSVQVFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGVIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1179 AA
molecular weight: 126187,07790 Da
isoelectric point:8,12400
aromaticity:0,07803
hydropathy:-0,32494

Domains

Domains [InterPro]
DC_0538
STR
1–703
DC_0538 DC_1942
cd19958
STR
327–414
cd19958 DC_0387 IPR030392
IPR030392
CHP
1081–1138
IPR030392 Coil
XAO16659.1
1 1179
Architecture
STR
ATT
STR 1-998 | ATT 999-1178 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO16659.1
1 1179
Domain Start End Length (AA) Confidence
N-terminal 1 463 463 0,2336
Central domain 464 662 200 0,3644
C-terminal 663 1179 516 0,5564
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-463
Central
464-662
C-terminal
663-1179

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FL12
[NCBI] 		3128053 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO16659.1 [NCBI]
Genbank nucleotide accession
PP400786.1 [NCBI]
CDS location
range 85938 -> 89477
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATTCAGGAAATATCATTGATCTAGGTATTGCTAAAGGCGGCCAGGTTGATGGTGATGTGACTATCAATGGTAAATTAACATTAAATGGCGCGTATGTTCAGACGCTGGCTGGTATTAATACCACGGGTGGTATTAATTCTGGGGCCGCTATAAGTGCAACAACTTATTATGCTCGGTCTGGTTCTTTTTATGCTCGTGCTCCAGATGCCAATGCGAATACACATATTTGGTTTGAAAATAACAATGGTATAGAACGTGGTGTGATTTGGGCTGTTCCGAACACTTCAGACCTTGGCCAGGTCAAAATTCGTGCAAAAACTACAGGTGGTGTTTTTGCCGGCGAGTACAGTTTCCGCTCTGATGGCCAATTTGAGGTTCCTGTAGCAGTTAAAATCGGCGGGGCCGCGATGCTAACCAAAGACGGTAACATTACATCGGGTTCATTGTTTGGTGGTAATCTTAATAACTATTTGAATACCATTAAAAATGACATTGTTACTGGTGATAATAAGAAAGTGAGTAAAACCGGTGACACGATGTCCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACTCTAACGGAACGTTTGTTGATTTAGGTTCAGAGAACTCTGATAAGAATAGCAGATTAACTCTTGCTCGTAAAATTGGCGATGGCGCTGGTGTAGCAATGCTTAAAGTTACTCCTGAAGGAAACGTGCAATTTGGTTATCAACCTACAGTTGCTACTCCATCTCCTACCAAGTATATTCTAATTAAATCTAACGGTCTTGAAGTAGAAGGGGATTTAGTTTTTAAGCAAACTTACCGTGGTGTTGAAGAAGCAGTTGATATTACTAATCAGACTATTGACCTTAATAGCCTTATTATTAGAGGATCAGATTTAGGTACTCGTAAGCTGTATAAATGCAGATCATCTGGAGGTGGTTCTAATATATTGAACAAACCTACATCTGATGGCAACTTTACTCTTGAAGTTCTGTCTTTACGCAAGGTTTCTGATACCGATTGGTCATGTAAGCAGACCTTTACTACAAAGAACAATAATGTTGTAGGCGTATATGTTCGCTACGGGCAAGTCGGCTCATGGACTGAGTGGAAAGAGGTTGTTGCTGGTGTTCAACCAATTAATTTAGGTGGTACTGGAGCAACTTCTGTAGCTGCTGCCCGTAATAACCTTGGTGTTGGTGAAGGCCAAACTGTAACATTCGGTAATTTAGTTACCAACAATTTAAATGCAAACGGACAAGTTAAAATCGGCAGGACCGGCGATGCATTAAGAATTTGGAATGCTGAATATGGTGCTATTTTCCGTCGCTCAGAAACAGCATTACATATTATCCCGACTCCTAAAGACGCCGGTGAAAGCGGTGGAATAAGTAATCTTCGTCCATTAAGTATCGGCCTTAATAATGGTATGGTGCAAATGCGTCATTCTGTTGAGTTAGGCGATGATGGAGCTGGCGGTAATATGATTACTGTTGATAATGATAGTAAAAATGTTGTGATAACTTCTAATGCCAGATTAAGCCCTAATTTCCGCATGCAATTAGGGCAGGCGTCGTACATTGATGCCGAATGCACTACCTCTGTTCGCCCTGCTGGAGCTGGTTCATTTGCTTCACAGAATAATGAAAACGTTCGTGCCCCGCTCTATATGAATATTGATAGGACTGATAATAGTACTTATGTTCCTATTTTAAAACAACGTTATGTTCAAGGAAATAGCTGTTATTCTTTAGGTACTTTAATAAATAACGGTGATTTTCGTTTACATTACCATGAAGGCGGCGACGGTTCTTCGACAGGTGCAGTTATAAAAGATATTTCCTGGGAATTTAAACGTAATGGTGATTTCTATTCTCCGGGGCGTTTGCGCACTGCAAACGTTTATATCGGAACTGATGGTAACATTACAGGTGGTTCTGGTAATTTTGCCAACTTAAATACCACGTTAAACCGTAAAGTTAATGTTGGCGGTTGGGCTGGTAGTTCTTATGGTGGATGGTACAAATTTGCTACGGTAACAATTCCTCAAGGTACTGGTACAGTAACTTTTAAGATTTCTGGTGGTGCTGGTTTTAATTTTAAAAGATATAGCCAAGCTTCTATTGCTGAGATAGTTCTTCGCACAGGTAATAATAATCCTAAAGGCATAAACGCTGTACTATGGAACAGGTCAGACCTAAGTTTTAATCAGATAGCTACTATGAATACATCTGGTGATACTTATGATGTATACGTGTTCTGTGACGGTTATACAAATGCATTAGTGGTTGAATATTCTTGTAGTGAAAACTCTTCGGTAACTGTAGTCGGTCTTAACGGAGGCATTCAACCGGCTGTTGATGCATTGCCTGAGGGACATGTTGTAGGTAAAACAGTTCGTCTGTTAAATAATATTGGCGGAACTTTCGCAGCCGGCGAATCTGACATTGTTACTCGTGGTGAATACGTTACTGATAATCAAAAAGGCATGCGTATTAAATCTAACGGTAATAATATCGGTTCTAATGCTGCTATACTTCGAAATGACGGCAGAAGTTTTTATATTTTAGCTACAGATAAAAATACAGCAGAAAAATCCGATGCAGCTAATGGTGATTGGAACTCATTGCGTCCTTTTACAATAAGCATGACTACCGGTGAAGTATCAATGAATAACGGCATAACTGTTCGTAACTATGCCACATTCTATAATGATATTGTTCTCAAAGATAATGGTTATATTCACTTTAATAAGTCTGGCAATAATCCAAGAAACATGAGTATATTCCATGCCGGAGATGCCACACGTGGTAACCGTATTGAAATTGCTGATGATTCAAGTTATTTAGTTTATTTTCAACGTTTACCGGGCGGCGCTAACCAGTGTACATTTAACTCTGCTGCTCTTTCTGGTATAACGCAGACTAACTCTTTTGGTGTCAATACATCAAACGCACTTGGTGGAAATAGTATAACGTTTGGTGATAATGACACTGGTATTAAGCAAAATGGTGATGGATTATTAGACATATATACGAACAGCGTACAAGTGTTCCGTTTCCAAAACGGTGATTTGTACTCATACAAAAATATAAATGCTCCAAACGTTTATATTCGTTCTGATATTCGTTTAAAATCCAACTTTAAACCTATCGAAAATGCACTCGATAAAGTTGAAAAACTTAACGGTGTCATTTACGATAAAGCTGAATACATCGGTGGAGAGGCAATTGAAACTGAAGCGGGTATTGTGGCTCAAACGTTACAAGACGTTTTACCAGAAGCTGTCCGTGAAACAGAAGACAGTAAGGGTAATAAAATACTCACTGTTTCTTCTCAAGCCCAGATTGCTCTTCTGGTTGAAGCTGTGAAAACACTTTCTTCTCGTGTAAAAGAACTTGAATCTAAACTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
25e1e198a869e2e0546e906c589f78a71e2b264708624a4c147357ebc7cd27e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5751
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank