Protein

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Genbank accession
YP_010844573.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAKGWSFGGLVAALKSAAFLNAGTARGEVITVGQKNAQIPTTAFVRNFNFNTYTFVNGEVLYVEMNSAVNVPPELQKWDLTSVSGAYMIITVLGISDNSNATILVSHGQASRPPIMYYSQGPSGGRSYTAHAVMTCKNASNFNINLLTSASDVGVYYQESDSVAGSAGGYPAAAAGTLEVLPSAYNVQQRYTSIYGNVWVRSRTLDASKNWADWRELARVNQRDRITEVGAIELYNNLPYIDFHHANSGLDFTARVIAEGYNQLAIRGTGTDFKLFLAGQYRGLAWGRGWGQEADGHVPYGAYNCEVGPDAWVPILTLNTTTVGYGYGSWISFGAYSRASDFSSPVISRRGDDGNVHNWLFQNDGNIDYTGNGGPFRFARENWAESSFLRDIRLASYQESTTWRGYGYRDESGWVITAIINQTADEFIDYVGRRKLQKYVNGAWYDSYSV
Physico‐chemical
properties
protein length:450 AA
molecular weight: 49555,29850 Da
isoelectric point:5,91628
aromaticity:0,13556
hydropathy:-0,27978

Domains

Domains [InterPro]
DC_0590
STR
9–450
DC_0590
cd19958
STR
138–218
cd19958
YP_010844573.1
1 450
Architecture
STR
STR 9-450
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps3T
[NCBI] 		2801357 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps3T
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010844573.1 [NCBI]
Genbank nucleotide accession
NC_079177.1 [NCBI]
CDS location
range 48388 -> 49740
strand +
CDS
ATGGCTAAAGGTTGGTCATTTGGCGGATTAGTTGCCGCCTTAAAGTCTGCTGCATTCTTAAATGCAGGTACTGCTCGTGGTGAAGTAATCACTGTTGGACAAAAGAATGCCCAGATTCCAACCACAGCATTTGTAAGAAACTTCAACTTCAATACCTACACTTTTGTAAATGGTGAGGTTCTGTATGTTGAGATGAACTCTGCTGTCAACGTTCCTCCAGAGTTACAGAAGTGGGACTTAACTTCTGTAAGCGGTGCGTACATGATTATAACTGTTCTCGGTATATCTGATAACAGTAACGCGACAATCCTAGTATCGCATGGTCAGGCATCACGACCTCCAATTATGTACTACTCGCAAGGTCCATCTGGCGGCAGGTCGTATACAGCACATGCTGTGATGACTTGCAAAAATGCCTCAAACTTCAACATTAATTTGCTTACAAGTGCGTCAGATGTTGGTGTTTACTATCAAGAGTCTGATAGTGTAGCCGGCTCTGCTGGTGGATACCCTGCGGCAGCGGCTGGTACTTTGGAAGTTCTTCCATCTGCGTATAATGTTCAGCAACGCTATACCTCAATCTATGGGAATGTTTGGGTTCGTAGTCGCACACTAGATGCCTCTAAGAATTGGGCCGACTGGAGAGAGCTTGCAAGAGTAAACCAACGCGACCGAATCACAGAAGTTGGTGCAATAGAGTTGTATAACAATTTACCATACATTGACTTCCACCATGCAAACTCTGGTTTAGACTTCACTGCCCGTGTTATCGCAGAGGGCTACAACCAACTTGCCATACGTGGTACTGGCACAGACTTCAAGCTGTTCTTAGCAGGGCAGTATCGTGGATTGGCTTGGGGTCGGGGTTGGGGTCAGGAGGCAGACGGACACGTCCCATACGGTGCTTATAATTGTGAGGTTGGTCCAGATGCTTGGGTCCCTATTTTAACACTTAACACAACTACGGTTGGTTATGGGTATGGCTCTTGGATTTCTTTCGGCGCTTACTCCAGAGCATCCGACTTCTCAAGTCCTGTAATCTCTCGCCGAGGTGATGATGGTAATGTGCACAACTGGCTGTTCCAGAATGATGGCAACATCGACTATACTGGCAATGGTGGCCCTTTCCGATTTGCACGAGAGAATTGGGCTGAATCCTCATTCCTGAGAGACATTCGTTTAGCGTCTTACCAAGAGTCTACCACATGGCGTGGCTATGGATATCGAGATGAATCTGGTTGGGTAATCACCGCTATAATCAACCAAACTGCTGACGAATTTATCGACTACGTTGGTCGTCGTAAATTGCAGAAATATGTGAATGGAGCATGGTATGACAGCTATTCTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5530320102b43b7d11a5fde94812d803b3bc581a5c1b16998a52e4289d5c72e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6706
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank