Protein

View in Explore
Genbank accession
AOO18958.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MSQLNVDRLISLGGGGGTAYIQLESSGNFNFDTGTLYVDSTNNEVGIGTTTPRASLDIATTDGIIVPVGTTAQRPSSPIEGIFRYNSTDRTFEGYSFNEGTNAVEWGPIAGAGGGTPTQSASRYSPDYSRGAVLKSDGTNAYWDASGQSTEWSMARIWTHGYVGGGYQSGSPWNNVNRTVHSTDTSTNLGNTLDRSGAYMAGSFSDNRHWFHSMENTYRGSSNYTSGFSMTSESGITHQAQWDMTVSRASMGSFQDYEFQGGYSYLIGGGNARTDAFNLKTEVMRTSGFPPNHGDGGDDPTWGGNARLKGWYKRAGTRQALIWNTESWQNWTQGPGGDGWKKILGTMLGHMYVGTGNNNQNGNQRVDDSSGVQVGGLNFGNMGEENFQIGMRKGYCLGNYNGAQNNNTFKVNYATDGYNNLGGSSPPSGHGGMSSAHCSSASAISGVDDAGAVQYDYGTNIPNY
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49579,88810 Da
isoelectric point:5,24871
aromaticity:0,11207
hydropathy:-0,67694

Domains

Domains [InterPro]
DC_0841
STR
1–270
DC_0841
IPR059888
RBD
46–111
IPR059888
AOO18958.1
1 464
Architecture
STR
STR 1-270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12_W1_24_0910
[NCBI] 		2928618 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO18958.1 [NCBI]
Genbank nucleotide accession
KX349325 [NCBI]
CDS location
range 30017 -> 31411
strand +
CDS
ATGTCTCAATTAAATGTTGACAGATTAATATCCTTAGGTGGAGGTGGTGGTACTGCCTACATTCAATTAGAGTCTAGTGGTAACTTTAATTTTGATACTGGCACTTTGTATGTTGATAGTACCAATAATGAGGTGGGGATTGGTACTACTACGCCAAGAGCATCTTTAGATATTGCTACTACTGATGGTATTATCGTACCCGTAGGAACAACTGCTCAAAGACCATCATCACCTATTGAAGGTATATTTAGATATAACTCAACAGACCGAACGTTTGAAGGTTATTCTTTTAATGAAGGTACTAATGCTGTAGAATGGGGACCAATTGCTGGTGCTGGCGGCGGAACACCTACTCAATCTGCAAGTAGATATAGTCCTGATTATTCCAGGGGTGCTGTACTAAAATCAGACGGAACTAATGCTTATTGGGATGCTTCTGGTCAGTCAACTGAATGGAGTATGGCAAGAATTTGGACGCATGGATATGTTGGTGGGGGTTATCAAAGTGGCAGTCCCTGGAATAATGTAAACCGTACTGTTCATTCTACAGACACATCTACAAACCTTGGTAATACTTTAGATAGATCTGGTGCTTACATGGCAGGGTCATTCTCAGATAATCGTCACTGGTTCCACTCAATGGAGAACACTTATAGAGGTTCTTCTAACTATACATCTGGATTCAGTATGACCTCTGAGTCAGGTATTACTCACCAGGCACAATGGGATATGACTGTTAGTAGAGCTTCGATGGGTTCATTCCAAGATTATGAATTCCAAGGAGGATATTCATATTTAATTGGTGGTGGTAATGCTAGAACTGATGCATTTAATCTCAAAACTGAGGTTATGAGAACATCTGGATTTCCACCTAATCATGGTGATGGTGGCGATGACCCTACATGGGGTGGTAACGCAAGACTGAAGGGTTGGTATAAGAGAGCTGGTACTCGTCAAGCATTAATTTGGAATACTGAATCTTGGCAGAACTGGACACAAGGACCAGGTGGTGATGGGTGGAAAAAGATTTTAGGCACAATGTTAGGTCACATGTATGTGGGAACTGGTAATAATAATCAAAATGGTAACCAGAGAGTTGATGATTCGAGTGGTGTTCAGGTAGGAGGTTTGAACTTTGGTAATATGGGAGAGGAAAACTTCCAGATTGGTATGAGAAAAGGTTATTGTTTGGGTAACTACAATGGTGCTCAGAATAATAATACCTTCAAGGTGAACTATGCTACTGATGGTTATAATAACCTCGGGGGTTCTTCACCTCCATCGGGTCATGGTGGCATGAGTTCTGCTCACTGTTCATCTGCATCTGCTATTTCGGGTGTTGATGACGCTGGAGCAGTTCAGTACGATTACGGCACAAATATTCCTAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
351682f6c5e5c6fdac30e073aa4a9ad25bbbe7538fc5565041053ba59dd12912
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50