Protein

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Genbank accession
VOH54410.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MSNLNDFFGSSGSEGGGAEVKRLDDLVDVSVASPTNGQTLVFDNTGWVNRKLSYNDLSNLPSISNTLSGLDDVDTAGTIAGYVLQFNGIKWVGMPASSSISLDDLSNVAITAPSINQTLLFNGSTWYNGSVDFNNLINTPVIPTQLGDLSDVSVSASTQEGSVLVFRTGQWIGSVINYNDLSNTPTIPQNDSFTFLGLSDTNDIPEANGFLKWNNLSTEIEYVTSIPSSAITGLANVATTGLLSNLVDVNVSGVSNGQVLTYNSSSSTWVPTTPSTGGGTSDPTAIFSTDGNTYINTEELVDELVLKTGPGSGNVNVILGGGGKIVVEGQSPEIISETSLKLTGSNLYLNELSWPTTDGTSGQVLATDGNGNLSFITVSAGGTTILINWRGEWEETSYNINDAVSYAGSSYICVAEVAGGDISIPPSSTNLNWNILALKGEDGSFFTYKGTYDSNTEYVDKDVVYYNGSSYVVLDGQGPITGITPTDQSKWGILALAGSGGTGSGFTYKNEYNNSETYQDQDVVSYGGSSYIVSPGNGPVTGILPTDSSIWGIIALKGQDGSGTGNQSLEDLTDVSSATPTSGNVLVANGSSWSSSKLSYSQLQGLPTLSVVATSGSYNDLLDKPSNTGTFIGLSDTDTPSLPNGFLKWNAQGTSISYVQSIPSESISGLATVATTGDYSDLTNTPNIPVVLDDLTDVNLVTPPVTGQALVYNGTYWLAGNAGSSSSTLASLTDVNLTTPTNNQVLSYDNTQNLWINTQIDYDDILNTPSIPVNNSFSLVGLNDTDNSAIPNAFLKWNSTGNSVEYVQSISASSITGLSTVATTGDYNDLTNLPSIPENISDLNDVDTTSTAPTDGQVLIYSAALGKWIPGDQSGTSPVPGGFPGEWLKINYTPGNLIGTIECSPNISYTIVDNVANNNLTLDLVFANRPYPPAGWMWYGYLVTQGRYVLKMQDTTSHPHTLELTTTENPFGTGTGKLSGFQCRVSTTGAQSYGPLQPTHAYVIFGW
Physico‐chemical
properties
protein length:1007 AA
molecular weight: 105897,67020 Da
isoelectric point:4,05003
aromaticity:0,08640
hydropathy:-0,14945

Domains

Domains [InterPro]
DC_0755
ATT
2–99
DC_0755 DC_1797 DC_1461
DC_0755
ATT
90–186
DC_0755 DC_0165 DC_0755
G3DSA:2.10.10.90
STR
388–493
G3DSA:2.10.10.90
VOH54410.1
1 1007
Architecture
ATT
STR
ATT
ATT 2-186 | STR 187-757 | ATT 758-1007
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VOH54410.1
1 1007
Domain Start End Length (AA) Confidence
N-terminal 1 880 880 0,9975
Central domain 881 996 117 0,0693
C-terminal 997 1007 10 0,9834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-880
Central
881-996
C-terminal
997-1007

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_MIJ3
[NCBI] 		2567864 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VOH54410.1 [NCBI]
Genbank nucleotide accession
LR588166 [NCBI]
CDS location
range 110889 -> 113912
strand +
CDS
ATGTCTAATTTAAATGATTTTTTTGGATCAAGTGGATCAGAAGGCGGGGGAGCCGAAGTTAAAAGACTAGACGACTTAGTAGACGTTTCTGTAGCTAGTCCAACTAACGGTCAAACCCTTGTTTTTGACAACACAGGCTGGGTAAACAGAAAACTTAGCTACAATGATTTATCTAATCTTCCGTCTATATCAAACACATTAAGTGGATTAGATGATGTAGACACTGCCGGTACTATAGCAGGATATGTATTACAATTTAACGGAATAAAATGGGTAGGTATGCCTGCCAGTAGTTCCATTTCGTTAGACGATTTATCTAATGTTGCTATTACAGCACCCTCAATAAACCAAACACTGCTATTTAATGGATCAACATGGTATAACGGATCTGTAGATTTTAATAATTTAATAAACACACCCGTTATTCCTACACAGTTAGGCGATTTGTCAGATGTTTCTGTCAGTGCTTCTACTCAAGAAGGAAGTGTACTAGTTTTTAGAACAGGACAATGGATCGGTTCTGTAATAAATTACAACGATTTGTCAAATACTCCTACTATACCGCAAAACGATTCATTTACATTCTTAGGTTTATCCGATACCAACGATATACCGGAAGCAAATGGGTTTTTAAAATGGAATAATTTAAGTACAGAAATAGAATATGTTACTTCAATTCCTTCGTCTGCTATAACAGGATTAGCCAATGTTGCAACAACCGGTTTATTATCCAATTTAGTAGATGTGAATGTCAGTGGTGTATCTAATGGCCAGGTTCTAACATATAATTCCTCTTCTAGCACATGGGTTCCTACTACGCCATCGACCGGCGGCGGAACAAGTGATCCTACTGCTATTTTTAGTACAGACGGTAATACGTATATTAATACCGAAGAATTAGTAGACGAGCTAGTTTTAAAAACCGGACCTGGATCCGGAAATGTAAATGTCATTCTTGGTGGCGGCGGCAAGATTGTCGTCGAAGGTCAATCTCCGGAAATAATATCGGAAACTAGTTTAAAATTAACAGGTAGCAATTTATATTTAAATGAACTATCTTGGCCTACGACTGACGGAACGAGCGGTCAAGTTTTAGCTACAGACGGAAATGGAAATCTCTCATTTATAACAGTATCGGCTGGCGGAACTACTATACTCATAAACTGGCGTGGCGAATGGGAAGAAACTAGTTATAATATAAACGACGCAGTAAGTTATGCTGGTTCTAGTTATATATGTGTTGCTGAAGTAGCTGGCGGCGATATTTCTATTCCGCCTAGCAGTACAAACTTAAATTGGAATATACTAGCACTAAAAGGTGAAGACGGATCATTCTTTACTTATAAAGGAACTTATGATTCTAATACTGAATATGTAGATAAAGATGTAGTTTATTATAACGGTTCATCTTATGTAGTGTTAGACGGTCAAGGACCTATTACAGGAATCACCCCTACTGACCAATCTAAATGGGGTATATTAGCGTTAGCTGGTTCTGGAGGAACAGGCAGTGGTTTTACTTACAAAAATGAATATAATAATTCGGAAACTTATCAAGACCAAGACGTTGTTAGTTATGGAGGATCTTCATACATTGTTAGTCCTGGCAACGGTCCTGTTACTGGTATTTTGCCTACCGATTCTTCTATTTGGGGTATTATTGCACTCAAGGGTCAAGACGGGTCTGGAACAGGTAACCAGTCGCTTGAAGATTTAACTGATGTATCTAGTGCCACTCCTACTTCGGGGAATGTGTTAGTAGCTAACGGGTCATCATGGTCTTCTTCTAAGTTATCATATAGTCAACTCCAAGGTCTACCCACTTTATCTGTAGTTGCTACTTCTGGTAGTTATAATGACTTATTAGATAAACCTTCTAATACAGGAACATTTATTGGATTATCAGATACTGATACTCCTTCCCTACCGAATGGATTTTTAAAATGGAATGCACAAGGAACATCTATATCTTATGTACAATCAATACCTTCAGAATCTATTTCTGGTTTGGCTACTGTTGCTACTACCGGTGATTATAGCGATTTAACTAATACACCTAACATACCAGTTGTGCTAGACGACTTGACCGATGTGAATTTAGTTACACCTCCCGTAACAGGGCAAGCTTTAGTATACAACGGTACGTATTGGTTGGCAGGCAATGCCGGAAGCAGTTCTAGCACACTAGCATCATTAACTGACGTTAACTTAACTACTCCTACCAACAATCAAGTATTATCGTATGACAATACACAAAATTTGTGGATTAATACACAAATCGATTATGATGATATTTTAAATACACCTAGTATACCCGTAAATAATAGCTTTAGCTTGGTTGGGTTGAACGACACGGATAATTCTGCTATTCCGAACGCATTCTTAAAATGGAACTCAACTGGGAATTCAGTAGAATACGTTCAGTCTATTTCTGCTAGTAGTATAACAGGATTATCTACTGTTGCTACAACTGGAGACTACAACGACTTAACTAATTTACCTTCTATTCCAGAAAATATAAGTGATTTAAATGATGTAGATACTACATCTACTGCACCTACTGACGGTCAAGTACTCATATATAGTGCAGCACTAGGAAAGTGGATTCCTGGAGATCAAAGCGGTACTAGTCCAGTTCCAGGCGGCTTCCCCGGTGAATGGTTAAAAATCAATTATACCCCTGGCAATTTAATAGGTACAATCGAGTGTTCGCCTAATATATCATACACTATAGTAGATAATGTTGCAAATAATAATCTTACTTTAGATTTAGTATTTGCAAATAGACCATACCCGCCTGCCGGATGGATGTGGTATGGTTACTTAGTAACACAAGGCAGATATGTATTAAAAATGCAAGATACTACTAGTCATCCGCATACGTTAGAGCTTACAACTACTGAAAATCCATTTGGGACAGGAACTGGAAAATTATCAGGATTCCAGTGCAGGGTATCAACTACTGGAGCCCAAAGTTATGGTCCTCTTCAGCCTACGCATGCATATGTGATATTTGGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1395f2f48e09d5b3d5e39c289dccf4859e3718f66b596c2a4270eb0c3a5f5578
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2791
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50