Protein

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Genbank accession
XLQ97993.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSTTITNLPETSKVNGSDYLILDQPDKTVKSTVSNFLADTGVVLATQLKDTNGADLIQSSNGNTVQEELNNNLLNDRELWHRSLAEAGLTLVNGSFEDGAILNNKTDAVWYIAGGQCYTWGGAFPKAVPADSTPETSGGVGSGAWVLVNATTQLPYVTPEIYGAKGDGVTDDLTAIQAALDSGKDVIFLKNIQYQPV
Physico‐chemical
properties
protein length:197 AA
molecular weight: 20882,88430 Da
isoelectric point:4,23873
aromaticity:0,07107
hydropathy:-0,19340

Domains

Domains [InterPro]
DC_1918
ATT
1–193
DC_1918
G3DSA:2.10.10.80
ATT
89–155
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
92–148
IPR040775 IPR012334
XLQ97993.1
1 197
Architecture
ATT
ATT 1-193 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ97993.1
1 197
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9931
Central domain 176 186 12 0,9295
C-terminal 187 197 10 0,1656
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-186
C-terminal
187-197

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage cardinal
[NCBI] 		3384775 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ97993.1 [NCBI]
Genbank nucleotide accession
PQ567651.1 [NCBI]
CDS location
range 430 -> 1023
strand -
CDS
ATGTCAACTACAATTACTAATTTACCCGAAACATCAAAAGTTAATGGTTCTGATTACCTGATTTTAGACCAGCCTGATAAGACTGTTAAAAGCACAGTTTCCAACTTTCTTGCTGACACTGGGGTGGTTTTAGCCACCCAGTTGAAAGATACAAATGGAGCAGATTTAATACAATCCTCAAATGGTAATACTGTTCAGGAAGAGTTGAATAACAATCTTCTTAATGATCGTGAACTATGGCATCGTAGTCTTGCTGAGGCAGGGTTAACTCTTGTCAACGGTAGCTTTGAAGATGGCGCTATATTAAATAATAAGACGGATGCTGTTTGGTATATTGCAGGTGGACAGTGCTATACATGGGGTGGTGCTTTCCCTAAAGCTGTTCCCGCTGACTCAACCCCTGAAACATCCGGTGGTGTTGGGTCGGGTGCGTGGGTTTTGGTGAACGCCACCACCCAGCTACCTTATGTCACCCCTGAAATTTATGGTGCAAAGGGTGATGGCGTAACTGACGACTTGACCGCGATACAAGCGGCATTAGATTCAGGTAAAGATGTAATTTTTCTAAAAAATATACAGTATCAGCCCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d7452d32d8ad036362401c865a2109385f7934e4bf4260373d3d7caa7c1488e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8366
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50