Protein

View in Explore
Genbank accession
NP_932576.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADLKVGTTIGGSPAWNQGNLPLVPSGDRILYKGARVYSESDKPSADELSVLSINGGRLKGQLQIDSASDNIFDLNSTDSGAVFMRYMHNNSNKAYTGIDASGNFYVRMADGASRAGIAFQIDNVSQDITFGANLKGPAGRAFSINKGDQPFIRDHGNGNVTISALSKVDGNPGDLYLGYNSAGMVTNTVRLESPLFWKGARQLVDSNGFILRSAMDNNYYNQSEADARFIRLNNNTTTDGFILSKTAEYTDAGRNMGYSGFYRHNGVDGFSGLTMHVAHPSYSNGAYSRGITFAYGSSSYGLYTYGYDSAGVRLANQKIYTEADKPTPQELGALAAEANAVSASKLQTPRRISLSSGASGSVLFDGSGDVVIPVTIANDSHTHNIYVKKSGDIMSGNLVVNAAVDANELRAGDATTKARIALSSDTVFFQGGPIGTTGLHKIAMSGYMGKGIDALTYWMTNGVTPVVRWGSVDNKMFHEGYRPFDVQSTSLASKSCNDALESGFYSIFGTTADTPYGTGPSGSTMVVSRWSGTGVSQTFYTYNSDRVFVRRLVGTTWNAWFELYSTSKIPTPAEVGALAVNANAVSATRLQTARLISGVPFDGTSNITITATNVGALPITGGDINGNLLVKGTLTNEGQLISYDSSTRGYGFRSTYSTGWLYTQTGKVDRDVNDQKHNLSGWYGTPLSALRFTMAEGTSPHVLWGSTSHDVLHIGKSYGVGIRQGNGASNGHIYTEDGSRDFDKLITAGRYSVDGQWLNGRAGAAAATYVGTAEVEVRAWGSGPAYIQTFTQLEGGLPSRYNRVGTGTYPNIVWASWESGTKEWEYQAGYRMMISRSGEGVYPYMTIHKADLPPTGTESVIGAWQSKIGAPPTANNPDSAQLATIVASVVDTTNRYATLRLSARDITTNGILSIVDIGKDGLVVTNGGKKVELTAGVARAEKFIASDPYAFVSSTSNTHGVYLGNSAADKRLILGGGNNTAGAVHVRPQGISTETGETVFNTNGTISNGTTPSAPGHLTNKVYVDNLIAQQVSKSGDIMTGQLTIHTANNAPLELKSTTAGVVTPQYIIGNDSTGAQRWYVGQASPNSPDVLLYSTANGTYLRLEANQISFNKNPISTALQGAAAGSLVRRDFLQTSLSSQTPNNPVYIGASANLNNYQTPGYYYQDSNANAGSGSNYPTQQAGALVVTKAAGIIQEYTVYGTGARYVRAFYTNVWSAWALVYDSTRPPGATAVGALPIAGGTLTGGYLQLQSATNSILEFHQPGRHAAMIFLSNGTGQLRFSTSNGAAGETNVRMTLDANGALATTGSINGGAGVYDVGQRVYSPNNPQPSLTPTQIGNALASMAYDAVGQYAMLLVAVDVGTWLVPGTVLPGSQLRYSTAEGKDPSNSPPGNWRLHGRINQGGQWGAWNVSLWQRVS
Physico‐chemical
properties
protein length:1420 AA
molecular weight: 150524,11320 Da
isoelectric point:7,70472
aromaticity:0,09296
hydropathy:-0,26465

Domains

Domains [InterPro]
DC_0466
STR
1–194
DC_0466 cd19958 G3DSA:6.20.80.10 cd19958
DC_1150
STR
155–590
DC_1150 IPR048388 DC_1924
DC_1619
ATT
503–861
DC_1619
NP_932576.1
1 1420
Architecture
STR
ATT
ATT
STR
RBD
STR 1-502 | ATT 503-861 | ATT 1053-1129 | STR 1150-1224 | RBD 1225-1420
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_932576.1
1 1420
Domain Start End Length (AA) Confidence
N-terminal 1 810 810 0,0981
Central domain 811 1009 200 0,4921
C-terminal 1010 1420 410 0,8784
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-810
Central
811-1009
C-terminal
1010-1420

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 44RR2.8t
[NCBI] 		2907963 Uroviricota > Caudoviricetes > Pantevenvirales > Biquartavirus > Biquartavirus 44RR2
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_932576.1 [NCBI]
Genbank nucleotide accession
NC_005135 [NCBI]
CDS location
range 150395 -> 154657
strand +
CDS
ATGGCAGATCTGAAAGTTGGAACTACGATAGGTGGTTCTCCTGCTTGGAACCAAGGTAATTTGCCATTAGTTCCAAGCGGTGATAGAATATTATACAAAGGAGCACGTGTTTACAGTGAATCTGATAAACCGTCTGCCGATGAACTGAGTGTTCTGTCAATAAATGGTGGTCGTTTGAAGGGTCAATTACAGATTGATTCAGCATCCGATAACATTTTCGATTTGAACTCAACCGATTCTGGCGCAGTTTTCATGCGCTATATGCATAACAATAGCAACAAAGCCTACACTGGCATCGACGCGAGCGGGAACTTTTACGTCCGCATGGCTGACGGCGCATCTCGCGCTGGCATTGCTTTCCAAATTGACAACGTTTCGCAAGACATAACCTTCGGGGCGAACCTGAAAGGTCCTGCCGGCCGTGCATTCTCAATCAACAAAGGCGATCAACCGTTCATCCGTGACCACGGCAACGGAAACGTTACAATTTCAGCTTTGTCAAAAGTAGATGGAAACCCTGGTGATCTGTACCTCGGATACAATTCTGCAGGCATGGTGACCAATACAGTTCGACTGGAAAGTCCGCTGTTTTGGAAGGGTGCGCGTCAACTGGTTGACTCTAATGGTTTCATCCTTCGTTCAGCGATGGATAACAACTATTACAACCAATCTGAAGCTGACGCACGTTTTATCCGTCTGAACAATAACACCACGACCGACGGTTTCATCCTGTCGAAAACCGCTGAATATACTGACGCCGGTCGAAACATGGGTTATTCTGGATTCTATCGCCATAATGGTGTTGACGGATTCTCCGGTTTAACGATGCATGTCGCTCATCCTAGCTATAGCAACGGAGCATACTCCCGTGGTATCACCTTTGCTTATGGTTCTTCGTCTTATGGTCTTTACACCTATGGTTATGACAGTGCTGGTGTTCGTCTGGCGAATCAGAAAATCTATACCGAAGCCGATAAGCCGACTCCGCAAGAGTTAGGTGCGCTCGCCGCCGAGGCCAACGCAGTATCAGCTTCCAAACTTCAGACCCCTCGTCGTATTTCGCTTTCAAGCGGTGCTTCTGGTTCTGTATTGTTTGACGGCTCTGGTGATGTTGTTATTCCGGTAACAATCGCAAACGACAGTCACACGCACAACATTTACGTTAAGAAATCTGGCGACATAATGTCAGGTAACTTGGTTGTTAATGCTGCAGTTGACGCGAATGAATTGCGGGCTGGCGATGCGACAACTAAAGCTAGAATTGCTCTGAGTTCGGACACCGTATTCTTCCAAGGTGGTCCTATCGGAACTACCGGTTTGCATAAAATCGCGATGTCTGGTTATATGGGCAAAGGAATCGACGCACTGACCTATTGGATGACCAATGGCGTTACTCCGGTAGTTCGTTGGGGTTCAGTTGACAACAAGATGTTCCACGAAGGATACCGTCCTTTTGACGTCCAGTCAACTTCATTAGCTTCAAAAAGCTGTAATGACGCTTTAGAATCAGGTTTCTACTCTATTTTCGGAACAACTGCCGATACTCCATATGGCACTGGACCTTCTGGTTCAACTATGGTTGTTTCACGCTGGTCTGGCACTGGAGTTTCGCAGACATTTTACACCTACAACTCCGACCGCGTATTCGTACGTCGCTTAGTTGGGACAACTTGGAATGCTTGGTTTGAGTTGTATTCAACCTCGAAAATTCCAACCCCTGCTGAAGTCGGGGCTTTGGCTGTAAACGCGAACGCTGTCTCAGCTACTCGTCTGCAAACAGCTCGTTTGATTTCTGGTGTTCCATTTGACGGTACTTCAAACATCACAATTACTGCTACAAACGTTGGTGCTCTCCCAATAACCGGCGGTGATATTAACGGTAACCTTTTGGTTAAAGGAACCTTGACGAACGAAGGTCAACTGATTTCGTACGACAGTTCGACCCGCGGTTATGGTTTCCGGTCAACGTATTCTACTGGATGGTTATACACCCAAACAGGTAAAGTTGATCGCGACGTAAACGATCAAAAGCATAATTTGTCGGGCTGGTATGGAACTCCGTTGTCGGCACTGAGATTCACCATGGCTGAAGGAACTTCTCCTCACGTCCTTTGGGGTTCAACGTCTCATGATGTTTTGCACATTGGTAAATCGTATGGTGTCGGAATTCGTCAAGGTAATGGCGCCAGTAATGGGCACATTTACACCGAAGATGGAAGTCGTGATTTCGACAAATTGATTACCGCTGGTCGTTATTCAGTCGATGGGCAATGGTTAAATGGCCGAGCCGGCGCAGCAGCTGCGACATATGTTGGAACCGCTGAAGTTGAAGTTCGCGCATGGGGCTCAGGTCCTGCCTATATCCAGACGTTCACTCAACTTGAAGGTGGTTTGCCGTCACGTTACAACCGAGTCGGTACCGGAACATATCCGAATATCGTTTGGGCATCATGGGAATCAGGCACAAAGGAATGGGAATATCAAGCTGGTTATCGCATGATGATTTCTCGTTCCGGGGAAGGCGTATATCCGTATATGACCATCCACAAGGCTGATTTGCCGCCGACTGGCACCGAGTCTGTTATAGGCGCCTGGCAGTCGAAAATCGGAGCTCCGCCTACAGCTAATAACCCGGATTCAGCACAATTAGCAACAATAGTTGCATCTGTCGTGGATACAACCAATCGTTATGCTACTTTAAGATTGTCTGCACGCGATATCACAACAAACGGAATACTGTCTATTGTTGATATTGGTAAAGATGGTTTAGTCGTGACCAATGGTGGTAAAAAGGTTGAATTAACTGCAGGCGTTGCACGCGCTGAAAAGTTTATTGCAAGCGACCCTTATGCATTCGTTTCAAGTACTAGCAACACCCATGGTGTTTATCTTGGCAATAGTGCTGCGGACAAGAGACTGATACTCGGTGGTGGTAACAACACCGCTGGCGCAGTTCATGTTCGTCCACAGGGTATTAGTACCGAAACAGGCGAAACAGTATTCAACACCAACGGTACCATTAGTAATGGTACTACCCCGAGCGCGCCCGGTCATTTGACCAACAAGGTTTATGTTGATAACCTAATTGCTCAGCAAGTGAGTAAATCTGGCGATATTATGACTGGTCAACTAACCATTCATACAGCAAACAATGCACCTCTTGAATTGAAGAGCACAACTGCTGGTGTAGTGACACCTCAATATATCATCGGTAACGATTCTACTGGGGCACAACGTTGGTATGTCGGCCAAGCAAGTCCGAATTCTCCAGACGTACTTCTGTATAGCACGGCAAACGGAACTTACCTTCGCCTGGAAGCAAACCAAATATCGTTCAACAAAAATCCAATATCAACCGCCTTGCAAGGTGCAGCAGCTGGTTCTCTGGTTCGTCGAGATTTTCTCCAAACTTCTCTGTCTTCACAGACACCGAATAACCCAGTTTATATTGGAGCCTCAGCGAACCTTAACAACTACCAAACACCCGGATATTACTATCAGGATTCCAACGCAAACGCGGGTTCCGGAAGTAACTATCCAACGCAGCAAGCTGGTGCTTTGGTTGTTACGAAAGCTGCTGGAATAATCCAAGAATATACCGTTTACGGCACTGGTGCTCGTTATGTTCGAGCGTTTTATACCAACGTCTGGTCAGCTTGGGCGCTTGTGTATGATTCAACCCGTCCGCCTGGAGCTACTGCGGTAGGAGCATTACCAATAGCTGGTGGTACTCTTACTGGTGGATATTTGCAATTGCAGAGTGCGACTAACTCGATATTAGAATTCCATCAACCTGGTCGACACGCTGCGATGATCTTCCTGTCCAATGGCACAGGCCAATTAAGATTTAGCACATCAAACGGCGCTGCTGGCGAAACGAATGTTCGCATGACATTAGATGCAAACGGTGCGCTAGCAACTACCGGTAGTATCAATGGCGGCGCTGGTGTTTATGATGTCGGGCAACGTGTTTATTCTCCGAATAACCCGCAGCCAAGTCTGACACCAACCCAAATCGGTAACGCTTTGGCGAGTATGGCTTATGATGCTGTTGGTCAATACGCAATGCTCTTGGTGGCTGTTGACGTAGGAACTTGGCTTGTGCCTGGAACCGTTTTGCCGGGTTCACAACTTAGATACTCTACAGCTGAAGGTAAAGATCCATCAAATTCTCCTCCAGGAAACTGGCGTTTGCACGGTCGTATAAACCAAGGCGGACAATGGGGTGCTTGGAACGTTTCGCTTTGGCAGCGTGTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7745d71c9c55b2fb41dff0f7ad9a1f59c3f9155d0d4727f728c15d26e99a1cd4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of Aeromonas salmonicida Bacteriophage 44RR2.8t Nolan,J.M., Petrov,V., Bertrand,C., Krisch,H.M. and Karam,J.D. 2016-01-01 — GenBank