Protein

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Genbank accession
WMM95235.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MGLISSAIPNLVQGVSQQSPALRLSSQAELMENAFPSLVEGLQKRPPLENVATMSASETIGSFSHLINRDVTERYFVFINASNQISIYDLNGVAKTVTYPDGTSYLNSTAPATDFRAVTVADYTFIVNTSQTTAMSSALTPLYPYTGLIAVKQGDYNQRYTVYLDGAIAANIETSETDQVETRTDDIATKLSDAINLVAGFTARADGSTVVITKTGNAQFDLATYDSLGDEGLSATVGTVQRFDELPNKAPEGYIAHVQGDQTNDFDDYYVKFVSDNGTQTKIGEGTWIEWVEPNIEYEIDASTMPHLLIRQPDGSFTFEVAEWGDRAVGDLTSVPNPSFIGRKITDVFFFQNRLGFLAGENTVMSRTSEYFDFFATTARTLLDNDPIDVAASHTKVSLLKHAIPFDRKLLLFSDQTQFILKGADFITPKNTSISQTTEYEASTLAQPASAGNVVYFPAKRGGFTSIREYYVIDDTDRSDAQDVTAHVAKYVPDGVFKMIASTTENALVCLTTQETNAVYLYKYHWAGREKVQSAWFKYTMNGLNILNAEFIESALYIVGNKDGKTILYKMQFDAGRTDINQDYVTRLDFRMAETDTTRTYDAVSNTTTIVTPYTLTTPVIVTRGTNQGQVIAQTATNGDTLTVSGDRTATEFYVGEAYLMTYEFSEPTMKEPTANGGRVAITGGRLQIKHWLLRYQDSGDFTVKVLPRYRPLQEYGLGGTNDYTGRVIGGGAGVLGTTTLASGDFRFPVMSKADRLSVIIESDSHLPCQFLSAEWEGSMHLRSRRVNG
Physico‐chemical
properties
protein length:789 AA
molecular weight: 86884,94470 Da
isoelectric point:4,81713
aromaticity:0,10393
hydropathy:-0,24309

Domains

Domains [InterPro]
IPR058003
TTP
1–787
IPR058003
WMM95235.1
1 789
Architecture
TTP
TTP 1-787 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95235.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9930
Central domain 140 344 206 0,1268
C-terminal 345 789 444 0,2965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-344
C-terminal
345-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-114
[NCBI] 		3072842 No lineage information
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95235.1 [NCBI]
Genbank nucleotide accession
OR420740 [NCBI]
CDS location
range 22485 -> 24854
strand +
CDS
ATGGGCCTAATTAGTTCTGCCATCCCCAACCTAGTGCAAGGCGTTTCACAGCAGTCACCGGCGCTCCGTCTGTCTTCACAGGCAGAGCTAATGGAGAATGCGTTCCCTTCGCTTGTTGAGGGGTTACAAAAGCGACCACCGCTAGAAAACGTAGCAACAATGAGTGCCTCGGAAACTATCGGGTCATTCAGTCATCTCATAAACCGAGATGTGACCGAGCGTTACTTTGTATTTATTAACGCTTCCAATCAAATTTCTATCTATGATTTAAATGGTGTGGCAAAGACTGTCACATACCCAGACGGCACTTCGTATTTAAACAGTACCGCACCAGCTACTGACTTTCGCGCAGTCACTGTAGCCGACTACACGTTCATAGTTAACACATCGCAAACAACAGCGATGTCCAGCGCGTTAACCCCACTATATCCCTACACTGGTCTCATAGCCGTCAAGCAGGGTGATTATAACCAGCGTTACACCGTATACCTCGATGGAGCTATTGCTGCTAACATTGAGACTTCTGAGACCGATCAGGTTGAAACGAGAACTGATGATATTGCTACAAAGCTATCAGACGCCATCAACCTAGTTGCAGGCTTCACGGCCCGTGCAGACGGTAGTACGGTTGTCATAACCAAGACAGGTAACGCTCAGTTCGACCTAGCAACCTATGACAGCTTGGGTGACGAAGGTCTCTCAGCAACTGTAGGAACCGTGCAGCGTTTCGATGAGCTACCTAACAAGGCTCCTGAAGGTTACATTGCCCACGTTCAAGGCGACCAGACAAACGACTTTGACGATTATTATGTGAAGTTTGTATCTGACAACGGAACACAGACGAAGATCGGTGAAGGGACATGGATCGAGTGGGTAGAACCTAACATTGAATATGAGATTGATGCATCAACGATGCCTCATCTTTTGATACGTCAACCAGATGGCTCATTTACATTTGAGGTAGCTGAGTGGGGCGATAGGGCTGTAGGTGACTTAACATCTGTTCCAAACCCATCCTTCATTGGTCGTAAGATTACAGACGTATTCTTCTTCCAGAACCGGCTAGGTTTTCTCGCAGGGGAAAACACGGTAATGTCGAGGACTTCAGAATACTTTGACTTCTTCGCGACCACCGCAAGGACACTGCTAGATAACGATCCGATTGATGTAGCTGCCAGCCACACAAAAGTATCCCTACTCAAGCATGCTATCCCGTTTGACCGTAAGCTCCTGCTATTCTCCGATCAGACACAGTTCATCCTCAAAGGTGCTGACTTTATCACACCTAAGAACACATCGATCAGTCAGACTACAGAATACGAAGCTAGTACATTAGCACAGCCTGCATCCGCCGGTAATGTTGTGTACTTCCCCGCAAAGCGTGGCGGCTTCACATCAATTCGTGAATACTATGTTATTGACGATACAGATCGATCAGATGCCCAAGACGTTACAGCACACGTTGCTAAGTATGTACCGGATGGTGTCTTCAAGATGATTGCAAGTACCACAGAGAATGCTCTGGTTTGCTTAACAACCCAAGAGACCAACGCTGTCTATCTTTACAAATATCATTGGGCAGGACGAGAGAAGGTTCAATCAGCTTGGTTTAAATATACCATGAATGGTTTGAATATTCTCAATGCTGAGTTCATCGAGAGTGCTTTGTATATTGTAGGAAATAAGGACGGGAAAACTATCCTCTACAAGATGCAGTTCGATGCAGGGCGTACAGATATCAATCAGGACTATGTGACCCGTCTGGACTTCCGAATGGCAGAAACAGACACCACAAGAACCTATGATGCCGTATCAAACACCACAACAATCGTGACACCTTATACGTTAACCACGCCTGTCATAGTAACTCGCGGGACCAATCAGGGCCAAGTGATTGCTCAAACAGCAACCAACGGTGACACGCTGACTGTCTCTGGTGACCGAACAGCTACAGAGTTCTATGTGGGTGAAGCATATCTGATGACCTACGAGTTCTCAGAGCCGACTATGAAGGAACCAACAGCTAATGGTGGCCGTGTTGCCATCACTGGTGGTCGCCTACAGATCAAGCATTGGCTCTTACGTTACCAAGATAGCGGTGACTTCACAGTTAAGGTTCTCCCTCGATACAGACCCCTACAAGAGTATGGGCTTGGTGGTACTAACGATTACACAGGTCGTGTGATTGGTGGTGGTGCCGGTGTTCTAGGTACGACAACTCTGGCTTCAGGTGACTTTAGGTTCCCTGTGATGTCCAAAGCTGATCGACTTAGTGTAATTATAGAAAGTGATAGCCACCTCCCCTGCCAGTTCCTATCGGCAGAATGGGAAGGTTCTATGCACCTCAGATCAAGAAGAGTTAATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1053c155edca8dadec261f22278a3af0d2855d07c6b9f9b8a9e0618ecfb280f9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3302
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50