Protein

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Genbank accession
GENB_4e3b7dba241e [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,74
Protein sequence
VITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWASGTNTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGPANAYTLTLVPQLQGGLVDGMILRVKFNTVNTGASTINVSGFGAKAIVGAANFPLTGGELGQGLIAELVFDATGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQIMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPATKLTVGTTNNISGPTGIRNTTSNTGNMNTWGSSSTTASYGNAALQIFGRGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVVTDESNIRFHVNSMAGTPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIFSGTLPFAPIASLSDYSQAPLTVYNSPTGPSAKPAVIAFIRPGNWGAFFGIDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPSWNGQTVWRSGNFDPATKVDLNAANATNGNMIFNRISGTGSGIASSGRVGAINLQNGAHSGQAAAVTFERGGSIFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 102974,09010 Da
isoelectric point:5,66534
aromaticity:0,10581
hydropathy:-0,25529

Domains

Domains [InterPro]
DC_0009
ATT
1–211
DC_0009 DC_1924
DC_1788
STR
167–697
DC_1788
GENB_4e3b7dba241e
1 964
Architecture
ATT
STR
RBD
ATT 1-211 | STR 212-697 | RBD 774-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_C1-14_Ab28
[NCBI] 		1548917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
LN610589.1_CDS_[38877..41771] [NCBI]
Genbank nucleotide accession
LN610589.1 [NCBI]
CDS location
range 38877 -> 41771
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
23ff07ad3e515c0caa146204bc99bf46fe9d07c07ad20737bf1e9f624685c3f7

                    

                    
                      AlphaFold3
                    
                  

                  

                  

                    

                      Source
                      AlphaFold3
                    

                    

                      Method
                      AlphaFold3
                    

                    

                      Resolution
                      0,7781
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50