Protein

View in Explore
Genbank accession
AFX93664.1 [GenBank]
Protein name
putative phage tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPKIKILVTPYVVKNKPETERNHVVTGVADGWEKTSLNADPNEILTESKGLDTLLTDCNLKPDGVTKIDPSKPIGKEVEIEIYDPDAIPVQTVTVTPDTATGTVGQQLTFTADILPADATYKDVEWSSSDEAKAKSLGNGVFDLKAVGTGIIVSATSIDGGVIGEAELTITAAVVAVTGVTLSPKTKTIAVGEKFTLAATVAPANATNKTVTYTSADPATATVNATTGEVEGKASGTAAITGKTADGNKTDVCTVTVS
Physico‐chemical
properties
protein length:258 AA
molecular weight: 26506,51220 Da
isoelectric point:4,61359
aromaticity:0,03488
hydropathy:-0,05039

Domains

Domains [InterPro]
DC_0078
STR
1–175
DC_0078 DC_1711
G3DSA:2.60.40.1080
STR
86–172
G3DSA:2.60.40.1080 G3DSA:2.60.40.1080
IPR008964
RBD
87–159
IPR008964 IPR008964
IPR003343
STR
89–149
IPR003343 IPR003343
IPR003343
STR
89–167
IPR003343 IPR003343
AFX93664.1
1 258
Architecture
STR
STR 1-258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage phiMAM1
[NCBI] 		1262513 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus MAM1
Host Serratia sp.
[NCBI] 		616 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Serratia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFX93664.1 [NCBI]
Genbank nucleotide accession
JX878496 [NCBI]
CDS location
range 154527 -> 155303
strand -
CDS
ATGCCAAAGATAAAGATCCTTGTGACGCCTTATGTCGTCAAAAACAAGCCTGAGACCGAGCGTAACCACGTCGTGACAGGCGTTGCTGATGGTTGGGAAAAGACCAGCCTGAATGCAGACCCCAACGAAATCCTGACCGAGTCCAAAGGGCTGGATACTCTGTTGACCGACTGCAACCTGAAGCCTGACGGTGTTACTAAGATCGACCCAAGCAAGCCGATCGGTAAAGAAGTCGAGATCGAGATCTACGATCCAGACGCCATCCCGGTTCAGACCGTAACCGTGACCCCTGATACTGCAACCGGCACCGTCGGCCAACAGCTGACCTTCACCGCTGATATCCTGCCTGCCGACGCCACCTACAAAGATGTTGAGTGGTCTAGCTCTGACGAAGCGAAAGCCAAGTCACTGGGCAACGGCGTGTTCGATCTGAAAGCTGTTGGCACTGGCATCATCGTGTCTGCGACTTCCATTGACGGCGGCGTAATCGGTGAAGCCGAGCTGACCATCACTGCAGCTGTGGTTGCCGTGACTGGTGTGACTCTGTCTCCTAAGACGAAGACCATCGCGGTGGGTGAGAAGTTCACTCTGGCTGCAACCGTGGCTCCAGCGAACGCCACCAACAAAACTGTTACCTACACCAGCGCCGATCCGGCGACTGCTACTGTCAACGCCACCACTGGTGAAGTTGAAGGTAAAGCGTCGGGCACTGCTGCCATCACCGGTAAAACCGCTGACGGTAACAAAACTGACGTCTGTACTGTAACGGTGTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
449aed407adf0ae6457065bd5494406b0534d74bf629a50cdc7895d27cc4cfdd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50