Protein

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Genbank accession
QBJ01082.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGRVQAGWGRPIQGMSQQADRDRINGQCTLQENMVPSVLDSLYKRIGTKHLFEMPMGVGAWDDRTVIYFYDRGDEEKYFVFVEPNTTTPIIYRIDGTRCTVDVDHLALDYCTAADPAKEMTFNTIGDYTFIANGGIQVQKSNQVQPANPDNMAIVYLQFATYSRDYQIHVNGATVASYHTVGGSYTDVGAANEAAEKIKTNYVAAQLAAAFNNKPYNVEVHDNVLVITKTDGPIYTITTTDSADGEDLIAVKNRVKSTAHLPPYAPQGWVLEVQDNNGYKRNSFFLVSEGYNGSNVTWREGVEGGQHLGFNLGTMPHVLVRESIINGVPHFKLRQGEWELRAVGNDITNPFPSFVGSYVQSVGTFQNRLFLTAGESAVFSRTNEFFNFFRETVQVQSDSDPWDAFSDSEKINLIKNSLVLDGDAVFFAESGQFIVSGDKPLTPSNGVFKQMTSFPMNVIAKPAITGESIMFAYDAGNYSGIREMFTDSDKDTKQARPITEHVEKMIQGKVQQLSSSPNSNILLVRSSVERNVVYVYDWMWNGPDKVQAAWHRWVFDPNCKILHCQFVQDNLYIVVLHGGKVYLELIPLVNDDDEQGMMFPCRLDSRVDVTATWNPELGYWWFDAPRDIPANELHNWRLVMGEGCFPEERGLPVEFTKSPTPKRYIVNAELAEIDPVQSNTVRLTLGRTYLSRYVLTQPFIRDQSGNVMSIDDITIGRVSINYTESAEFTAYVNDDINHQWMYPFSGRVMGDIRNTVGFAKLRSGTFPFPVRLKSHRSRIEVQSDSHYPLKIRGFEWEGSYQQTGRRM
Physico‐chemical
properties
protein length:807 AA
molecular weight: 91126,32340 Da
isoelectric point:5,34942
aromaticity:0,11400
hydropathy:-0,36592

Domains

Domains [InterPro]
IPR058003
TTP
1–807
IPR058003
QBJ01082.1
1 807
Architecture
TTP
TTP 1-807
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ01082.1
1 807
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,8048
Central domain 177 375 200 0,1961
C-terminal 376 807 431 0,3161
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-375
C-terminal
376-807

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage HJG
[NCBI] 		2510450 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ01082.1 [NCBI]
Genbank nucleotide accession
MK455770 [NCBI]
CDS location
range 25508 -> 27931
strand +
CDS
ATGGGAAGAGTACAAGCTGGGTGGGGACGCCCCATCCAAGGTATGTCTCAACAGGCAGACCGTGACCGCATCAATGGTCAATGTACATTGCAGGAGAACATGGTTCCCTCTGTGCTGGACTCGTTGTATAAGCGGATTGGCACCAAGCACTTGTTTGAGATGCCTATGGGTGTAGGTGCTTGGGATGACCGAACAGTCATCTACTTCTATGACCGAGGTGATGAAGAGAAGTATTTCGTCTTCGTTGAGCCTAACACAACCACACCGATTATCTATCGCATTGATGGCACTCGCTGCACGGTTGACGTAGACCACTTGGCATTGGACTATTGCACAGCAGCAGACCCAGCCAAGGAGATGACCTTCAATACAATTGGTGACTATACCTTCATTGCGAATGGTGGTATCCAAGTACAGAAGTCAAATCAGGTTCAGCCAGCTAACCCCGACAACATGGCGATAGTCTACTTGCAGTTTGCTACCTACTCACGTGATTATCAAATCCATGTCAACGGTGCAACTGTTGCGTCATACCATACTGTGGGTGGTTCATACACAGATGTCGGTGCAGCTAACGAGGCAGCAGAGAAAATCAAGACCAACTATGTGGCTGCACAGTTGGCTGCTGCTTTCAACAATAAGCCGTACAACGTAGAGGTTCATGACAACGTTCTGGTAATCACCAAGACGGATGGGCCAATCTACACAATCACAACAACCGACTCAGCAGATGGTGAGGACTTGATAGCGGTTAAGAACCGAGTTAAGTCAACTGCACACCTACCTCCGTATGCACCCCAAGGTTGGGTACTGGAAGTTCAGGACAACAACGGGTACAAGCGAAACAGCTTCTTCCTAGTGTCAGAGGGTTACAATGGCTCTAACGTAACTTGGCGAGAAGGTGTCGAGGGTGGACAGCACTTGGGATTCAATCTGGGTACTATGCCACACGTTCTTGTCCGAGAGTCAATCATCAATGGTGTGCCTCACTTCAAGCTACGCCAAGGTGAGTGGGAACTCCGTGCTGTTGGTAACGACATCACCAACCCTTTCCCCTCATTCGTTGGTAGCTACGTGCAATCTGTTGGTACATTCCAGAACCGCCTGTTTCTTACAGCAGGTGAGTCGGCAGTGTTCAGTCGGACGAATGAGTTCTTCAACTTCTTCCGAGAGACTGTGCAGGTGCAGAGTGACTCCGACCCTTGGGATGCATTCAGTGACTCTGAGAAGATTAACCTCATCAAGAACAGCTTGGTGCTGGATGGTGATGCGGTATTCTTCGCTGAGTCTGGTCAGTTCATCGTATCTGGTGACAAGCCACTTACACCGTCTAATGGTGTGTTCAAGCAGATGACCAGCTTCCCGATGAACGTGATAGCCAAGCCAGCAATTACTGGTGAGTCAATCATGTTTGCATATGATGCTGGGAATTACTCTGGCATCCGAGAGATGTTCACTGATTCTGACAAGGACACCAAGCAGGCTCGTCCAATCACCGAGCACGTTGAGAAGATGATTCAAGGTAAGGTGCAGCAGTTGTCATCAAGCCCTAACTCCAATATCCTGTTGGTTCGTAGCAGCGTGGAACGTAACGTTGTTTATGTCTATGACTGGATGTGGAATGGGCCGGACAAGGTTCAGGCAGCTTGGCACCGTTGGGTGTTCGACCCTAACTGCAAGATTCTGCACTGCCAGTTTGTTCAGGACAACCTGTACATCGTTGTGCTGCATGGTGGCAAAGTTTACCTCGAACTAATCCCGCTGGTGAACGATGATGATGAGCAGGGGATGATGTTCCCTTGTCGTCTCGACTCACGTGTAGATGTTACAGCGACTTGGAACCCAGAGCTTGGTTATTGGTGGTTCGATGCACCGAGAGATATCCCTGCAAATGAGTTGCATAATTGGAGGCTCGTAATGGGTGAGGGTTGTTTCCCAGAGGAACGTGGTCTACCCGTAGAGTTCACCAAATCACCAACCCCTAAGCGGTATATCGTGAATGCCGAGCTGGCTGAGATTGACCCAGTGCAGTCTAACACTGTGAGACTGACTCTTGGGCGGACTTACCTATCTCGGTATGTTCTGACACAGCCATTCATCCGTGACCAGTCAGGTAACGTGATGAGCATTGATGACATCACCATTGGTCGTGTGTCCATCAACTACACAGAGAGTGCTGAGTTCACTGCGTATGTTAACGATGACATTAACCACCAATGGATGTACCCGTTCTCTGGTCGTGTCATGGGTGACATCAGGAACACCGTTGGCTTTGCGAAGCTACGGTCAGGCACCTTCCCATTCCCAGTGCGCCTCAAGTCACACCGAAGCCGCATTGAGGTTCAGTCAGATTCGCACTACCCGTTGAAGATTCGTGGCTTCGAGTGGGAAGGCTCATATCAACAAACAGGGCGGAGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0785268afaa7346277c11cb43cf2cf9307482083fb6ea0076ac427b825c69850
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3179
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two novel virulent phages infecting the Aeromonas hydrophila isolated from rainbow trout (Oncorhynchus mykiss) Cao,Y., Lu,T., Li,S. and Wang,D. 2019-11 — GenBank