Protein

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Genbank accession
WVQ00233.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTIRIVRNDAGNCINFYGTSNPTYWNACLSASIDEDFPVRINVRNDIRSAEEGTDVYEFYQIPYTNFVDRDNNSFESPAECAQYITDNANVSGDVGTYIFSETDTLDVEREVTDTTVLFSNGDIYPVNALRAIADTNGTITVRTVRGDKDIYLNIRHYNLTVNSGALSFTTLSAAVDRLNEVLTGTTIGTNGGSPAANAPTASSATTFEIYGDRITETGSGSTLGYTSTADGDNFDTSNGILSVQSISEAGEFFEFSQDSGDWTNTVGLTFGLFDETTYDRSDLEVDAPSNSVKAVIRLRVKNSGLIFKDPGSTYGRLNESGLHNELDTRTTFRVGLDGERRGYVAFLLPTGLYEVVGRTETAIASGTELKFVAILPLANEMNGVRNMTVNTLIPGAPILTWYYIESPDGSFHYPLFATAAEANFVDEQYGTAGTGLGSSHQELFVDEQPSQNIWFMPDTFAFEDESSAPTSPVGVPWNEIQTGDDANYIPAAYVDNTVTVDEGATINLEIKPSGDSATYNVTGVPSGLAFDGSYLTGTAPEVADNNVNNPNDTFTITVTKANNYGSSVGTLTLVVNNLTLPATALSGFTWDNTSTTLVDEFTMGEGSVVTMDDTLQDGKRFVIDEAWVETNVLPNLLADGDEVIIGVAASGANWTSIEDADFDFYMSWRRNATNQIISNLYDGSDDELVINSLTDAYYDYGFEVNGTTVYLIACNVGDLNSEPSPALGGNFVRVKTIASYSGTIPLTLTMATISAEAGLSTSGIAEIDTPLPTGNLTDWNKAIVFSGNTERTYQFDFTETFNPIQMARTSQLVSAPSTTGNTVSTGHPWATTVVFRTDGNASDQYIWTQGEGTASTNDNIYLRLDSNGAMYFGWGRQGDLNEVVIGNGFTQSSATSQWYGVYIAHNGTRLSATDATAANLAAAFDIRIMKFFNPTGWDFVGANGSFADSVGNRSTVTNWNRGGSTVGGRMDRIYSGGFYVGGSTGANKSFHGKVASMVVTTLRQGVSMPSDAEILEMTTDPMRWLSTYKAGNNYRSAGGTSETATFTLGNTFSGWATHVWLMGDGNTDTFPDIRNQVQVNDNYTKLVMTSMVAGDIQTVNIAGLT
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 119264,27340 Da
isoelectric point:4,18820
aromaticity:0,10298
hydropathy:-0,22746

Domains

Domains [InterPro]
IPR013783
STR
489–579
IPR013783
DC_1726
STR
551–1096
DC_1726
WVQ00233.1
1 1107
Architecture
STR
STR 489-1096 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVQ00233.1
1 1107
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0420
Central domain 11 283 274 0,9132
C-terminal 284 1107 823 0,3619
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-283
C-terminal
284-1107

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage MA01
[NCBI] 		3117464 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVQ00233.1 [NCBI]
Genbank nucleotide accession
PP110484 [NCBI]
CDS location
range 80536 -> 83859
strand +
CDS
ATGTCTACCATCCGCATTGTTCGCAACGACGCAGGTAACTGTATTAACTTTTACGGTACCTCCAACCCAACCTATTGGAACGCCTGTCTGTCGGCTTCGATCGACGAGGACTTTCCCGTTCGCATCAACGTTCGTAACGACATCCGTTCGGCAGAAGAGGGTACTGATGTCTATGAGTTCTACCAGATTCCTTATACCAATTTCGTTGATAGGGATAACAACTCCTTTGAATCACCAGCCGAATGTGCTCAGTACATTACTGACAATGCAAACGTAAGTGGTGACGTTGGTACTTATATCTTCAGTGAAACTGACACTCTAGATGTCGAACGCGAGGTGACGGATACGACTGTACTATTTTCTAATGGTGATATCTACCCCGTAAACGCTCTGCGTGCTATTGCTGATACCAACGGTACGATTACTGTTCGTACTGTTAGGGGAGACAAGGACATCTATCTGAATATCCGTCATTACAACTTAACCGTAAATAGTGGCGCTCTTTCATTCACCACCCTGTCTGCTGCGGTAGACCGACTCAATGAGGTCTTGACGGGAACCACTATTGGAACTAATGGTGGTAGTCCCGCCGCTAACGCTCCTACCGCGTCCAGTGCTACTACTTTCGAGATTTACGGAGATCGAATTACCGAGACTGGGTCTGGTTCTACCCTGGGTTATACCTCAACCGCTGACGGTGACAACTTTGACACCTCCAACGGTATCTTGTCCGTTCAGTCTATTTCTGAGGCTGGTGAGTTCTTTGAGTTTTCGCAGGACTCTGGCGACTGGACCAATACAGTAGGTCTGACCTTTGGCTTGTTTGACGAAACCACCTACGACCGTTCTGACTTGGAAGTTGACGCTCCTAGTAACTCCGTCAAGGCAGTTATCCGTCTTCGTGTTAAGAACAGTGGACTTATTTTCAAGGATCCCGGTTCCACCTATGGTCGCCTGAATGAGTCTGGTCTCCATAACGAACTTGATACTCGTACCACCTTCCGCGTCGGTCTGGACGGCGAACGTCGTGGGTACGTCGCTTTCCTGCTCCCCACCGGTCTCTATGAGGTAGTAGGCCGCACTGAGACCGCTATTGCTTCTGGTACAGAACTTAAGTTCGTTGCCATCCTGCCGCTGGCTAACGAGATGAACGGTGTTCGCAATATGACCGTTAACACCTTGATTCCAGGCGCCCCAATCCTGACCTGGTACTATATTGAATCTCCTGACGGTTCATTCCACTACCCCTTATTTGCAACCGCTGCTGAGGCGAACTTTGTAGATGAGCAGTATGGTACTGCTGGCACCGGCCTTGGTTCTTCCCACCAAGAACTTTTCGTAGACGAACAACCTTCCCAGAATATCTGGTTTATGCCAGACACCTTCGCGTTCGAGGATGAGTCGTCGGCCCCGACGAGTCCTGTAGGTGTACCCTGGAATGAAATTCAGACAGGAGACGACGCAAACTACATTCCCGCGGCCTACGTTGACAACACTGTAACTGTTGACGAGGGGGCGACAATCAACCTGGAAATCAAACCCTCTGGAGATTCCGCAACTTACAACGTGACAGGGGTACCCTCTGGACTTGCCTTCGATGGTTCCTACCTGACTGGTACCGCCCCCGAGGTTGCTGACAACAACGTCAATAACCCAAACGACACTTTTACCATTACAGTTACGAAGGCTAACAACTATGGTTCATCTGTAGGCACGTTGACTCTTGTCGTCAACAATTTGACACTACCCGCCACTGCTTTAAGTGGGTTTACCTGGGATAATACCTCCACCACCCTTGTGGATGAATTCACCATGGGAGAAGGTTCTGTCGTAACTATGGACGATACTCTTCAGGACGGTAAGCGTTTCGTTATTGACGAGGCGTGGGTCGAGACTAACGTCTTGCCCAACCTGCTGGCCGATGGCGACGAAGTAATTATCGGTGTTGCCGCTAGTGGTGCTAACTGGACATCAATCGAAGACGCGGACTTTGACTTCTACATGAGTTGGAGACGCAACGCTACAAATCAGATTATCTCAAACCTTTATGATGGTTCTGACGACGAGCTTGTAATTAACAGCCTGACAGATGCCTACTATGATTATGGTTTTGAGGTTAATGGTACCACCGTTTACCTAATCGCCTGCAACGTTGGTGACCTAAACAGCGAACCGTCTCCTGCTCTCGGTGGTAACTTTGTAAGGGTCAAAACTATCGCTAGTTACAGTGGCACGATTCCCTTGACCCTGACAATGGCAACGATTTCGGCAGAGGCTGGTCTGAGCACTTCTGGAATTGCTGAAATTGACACCCCACTTCCGACTGGCAATCTCACGGACTGGAACAAGGCGATTGTTTTCTCAGGAAATACCGAGCGAACATATCAGTTTGACTTCACCGAAACTTTCAACCCCATACAGATGGCTCGCACGAGTCAACTGGTGTCGGCACCGTCCACGACTGGTAACACTGTCTCCACTGGACACCCTTGGGCTACCACTGTTGTCTTCCGCACTGACGGCAATGCCAGCGACCAATACATCTGGACTCAGGGTGAAGGTACAGCATCTACGAATGACAACATCTACCTACGCCTAGACTCCAACGGAGCCATGTACTTTGGTTGGGGTCGCCAGGGTGACTTGAATGAAGTTGTTATTGGTAACGGTTTTACTCAATCTAGTGCTACTAGCCAATGGTACGGCGTATACATTGCTCATAACGGCACCCGCCTCAGTGCTACCGATGCAACTGCCGCCAACTTAGCAGCAGCCTTTGATATTCGTATTATGAAGTTCTTCAACCCAACCGGTTGGGATTTCGTGGGTGCTAACGGTAGTTTTGCTGACTCAGTTGGCAACCGCAGTACTGTGACTAACTGGAACCGTGGTGGCAGTACCGTTGGTGGCCGCATGGACCGCATATACTCTGGTGGATTCTATGTCGGCGGCAGCACCGGTGCAAACAAGAGTTTCCACGGCAAGGTTGCCTCCATGGTTGTCACGACCCTGCGTCAAGGTGTGTCTATGCCCTCGGATGCTGAAATTCTGGAGATGACTACCGACCCAATGCGATGGCTGAGCACTTACAAAGCTGGCAACAATTATCGCTCTGCTGGAGGCACCAGCGAAACTGCCACCTTTACTTTAGGCAACACTTTCTCTGGCTGGGCTACTCATGTTTGGTTGATGGGTGACGGCAATACTGATACGTTCCCTGATATTAGGAACCAGGTTCAGGTTAATGACAACTACACGAAGTTGGTTATGACTTCCATGGTCGCTGGTGACATTCAAACGGTGAACATCGCCGGACTCACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d2718cb9024fb1c65cb4e67a2473ed42706e799b4857f2aee107ed8a8bfe05e5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50