Protein

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Genbank accession
AGH32159.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MRQLPNEQQLFSSKDGSTWIPHLDGNPRGDIGDWLHQNLTWDEMCTVKRQSVDLNEYKETKKDQIRASCRGEITNLFVSDALGSNHNYDCREEDQANIVTRAKASEIDSLPKKVWAHDGTEFSRTDHTTAQLQQLVVDMESHIETCQAKLEGLINQVNACTTCDQVDAVKW
Physico‐chemical
properties
protein length:171 AA
molecular weight: 19476,36520 Da
isoelectric point:4,96929
aromaticity:0,05848
hydropathy:-0,77661

Domains

Domains [InterPro]
DC_0271
STR
2–171
DC_0271
IPR025484
STR
56–168
IPR025484
AGH32159.1
1 171
Architecture
STR
STR 2-171
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 11895-B1
[NCBI] 		754075 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH32159.1 [NCBI]
Genbank nucleotide accession
HQ634157.1 [NCBI]
CDS location
range 56727 -> 57242
strand -
CDS
ATGAGACAACTACCAAACGAACAACAATTATTTTCATCTAAAGATGGCTCCACATGGATACCTCATCTAGACGGAAATCCACGCGGGGATATTGGTGATTGGCTGCATCAAAATCTAACTTGGGATGAAATGTGCACAGTTAAAAGGCAGTCGGTTGATTTGAATGAATACAAAGAAACTAAAAAAGACCAAATCCGCGCCAGTTGCAGAGGTGAAATAACTAACCTTTTTGTATCTGACGCGCTTGGTTCCAATCACAATTATGATTGCCGAGAAGAAGATCAGGCAAACATTGTGACGCGAGCCAAGGCTAGTGAGATTGACAGCTTACCCAAAAAAGTATGGGCGCACGATGGTACTGAATTTTCACGCACCGATCATACAACAGCGCAATTACAACAATTAGTCGTAGATATGGAATCTCATATCGAAACTTGTCAGGCGAAACTTGAGGGTTTAATTAACCAAGTTAATGCTTGTACGACTTGCGATCAGGTTGATGCGGTTAAGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a14675dfb1cb37bad7e403c7fdd6eaa2d416e60117ddb6f21d11921cbf021e00
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8058
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage 11895-B1 Henn,M.R., Wharam,S., Gilg,I., Martinez Martinez,J., Wilson,W., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank