Protein

View in Explore

Genbank accession

WJZ48860.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,93

Protein sequence

MSAAEWIEGAGGGGKGGGGSQRTPQEAPNTLRSTSKARIIDALGEGEIVGLANGLKSVYLDDTPLQDENGAFNFQGVTVHTRTGEPDQTHIPGFPAVETANDVSTEVTQGAPIVRTVGNLDADAVRVTVQLPALNEQNTSNGDLVGASVEVAIDVRPMGGTWAERKRDTIAGKTTSPYQRTYRIELTGSGPWDVRVRRITPDSDAATLNNATYWATYTEVIDAKLSYPDTALVALEVDAQQFGNQIPARSYDVKGLIIRVPDNYDPATRSYSGFWGGNFKLAWSDNPAWCYYDLATKTRYGAALANVDKWALYQIGQYCDELVPDGFGGEEPRFTFNTVLASQKEAITALHTLASAFRGMTYWGTNTVMPVADMPADPVKLVTPANVIDGEFVYEGTGLKARHSVAMVSYNDPNDNYRQQVEVVEDAEAIELYGWRPLEINAVACTSRGQAHRLGKWTLASERAETETVSYRASLDHADVRPGDIISVSDPTTAGARLGGRIVATGTEALTLDNVPEQASGANWFLDVMLPSGAVERRAVASFNGDEVALANPLSAPPIVGAVWILSSQAVEPRRFRVLANIEEAARVYHITALEHDPTKYGRIELGLDLPEPDYSLLPTGPVVAPYSLTAQAFTYLAGGTEHQGMTISWTPSDDPRVLRYIVEVQGPSDLRWRTVYTESGTSVDLRDVEPGQWMIRVRGVTGIGTASPWAALTTNIAGLLLPVPPDSVDIEVGTFTITLRPRGAYPGQMFEFWRSNVALALNQITSNAVRLTVSTDLTDTELSPGTTYYYYVRGANAYGVSSWYPVQATTDTTPEKLLQALSDSIRESELDQALQQRIDKIDGPETLPGSVAQRIAAEAEQRSEEVETVRGELVDGFEAEALARTQAIQQETDNRTVAITQLSEQVETEFGLLGLEINAIAAAYDATAASIYTMTQIRINEAEVVATQINQLSGRVEDNESLILDERQIRTNQYSSLATQVGILSARLDARPSLNSGFEPGADFDAWSATSGNAISAVTSGVYSGLQSALVTSTTASANPNNGGVRRIIAPETAAEFAGHEIRLAVYAKQPATGAAAEFAMAYQIAGQSVQWQRFTPTAEWAFYDVVIDVPEVTGGAQHAVAIWGSTAGGGNGVQVDRLLVTFAETDIPEVTAAIEQIQQALVDQQQAVAQELSGFETQLNSNTSAIQQEITARTTLTDSFATSIQTLQTQTQNNAAAIIAERDAWSSETDALAQQIEQLVADLGDGGAASLEEERQVRASEDEYLASLQRVLAAAEGVSSAAYQFQTTTRITAEEAEARRNEQLQAQIGDTQAAIQNEATVRANADSAQASQISALQSAASGNAASIQQEANTRASADSALSQQINTVQAAFDDELASVQQATQAQYNQTTQRLEAMWTLRIDNGGRVSGIGLGDDGEESLLGFRADRIYFAHPNSGDEVFPMVLDGGSVVMNDALINKLLFTKLRSSDDSLVFQNGKLQAEYIAVDDLVVRQGQSSNYLVGQRGWRLTTTGGEINFPIQFNNVQGAGALAGLDSVGYGDLTGAKPPTNADHTGSNTAFDTSRVAGTAASTVRDRANAGNNANNRVNNWTRPDSTLIDGNKIFTGDAYVDTLQIKGQAVTIPLSAYTGGAMVVGSEGGNNDVGGYRDYKDIQNLWVPSLPGTTEILCSFRVVFQISDGIGYPEVRLVEWNSSNMTVRYQSRIDPGLNTFAVVIPPRPNGRAFVLQLRFGSNGARNPGGLQFHASNRLIRTLTLKDNR

Physico‐chemical properties

protein length:	1759 AA
molecular weight:	189178,16190 Da
isoelectric point:	4,58022
aromaticity:	0,07334
hydropathy:	-0,26765

Domains

Domains [InterPro]

DC_0129
STR
3–972

DC_0129 G3DSA:2.60.120.260 DC_0068 IPR015406

IPR053171
Unmapped
13–1245

IPR053171 DC_1153

IPR055385
ATT
97–223

IPR055385 IPR032876 IPR003961 IPR003961 DC_2230

IPR013783
STR
632–718

IPR013783 IPR013783

IPR036116
STR
645–809

IPR036116

IPR003961
STR
646–715

IPR003961 IPR003961

IPR057587
ATT
725–822

IPR057587

WJZ48860.1

1 1759

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

STR 3-96 | ATT 97-223 | STR 224-341 | ATT 342-504 | STR 505-724 | ATT 725-822 | STR 823-972 | STR 994-1609 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0129	STR	DC_0129	3	972	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR053171	Unmapped	-	13	1245	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	97	223	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	342	504	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	628	707	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	632	718	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036116	STR	IPR036116	645	809	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR003961	STR	DC_0003	646	715	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	722	816	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	723	815	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	723	802	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR057587	ATT	DC_0130	725	822	InterPro cluster	Tip attachment protein J, second Ig-like domain	Central	Medium	Text match	309 proteins / 309 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	994	1143	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_2230	STR	DC_2230	1133	1230	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
DC_0068	STR	DC_0068	1218	1291	Novel HMM	DC_0068	Central	Low	Positional only	24 proteins / 24 hits
DC_1153	STR	DC_1153	1282	1609	Novel HMM	DC_1153	Central	Low	Positional only	12 proteins / 12 hits
IPR015406	RBD	DC_0135	1382	1519	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Halomonas phage vB_HmeY_H4907 [NCBI]	3056163	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Halomonas meridiana [NCBI]	77097	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Oceanospirillales

Coding sequence (CDS)

Genbank protein accession

WJZ48860.1 [NCBI]

Genbank nucleotide accession

OQ832096.1 [NCBI]

CDS location

range 3954 -> 9233
strand -

CDS

ATGAGCGCAGCTGAATGGATTGAAGGTGCGGGCGGTGGCGGCAAGGGTGGCGGCGGCAGCCAGCGCACGCCGCAGGAAGCGCCCAACACGCTGCGTTCGACCAGCAAGGCGCGCATCATCGACGCGCTGGGGGAAGGGGAGATTGTCGGCCTCGCCAATGGCTTAAAGTCGGTCTACCTAGACGATACACCGCTGCAGGACGAAAACGGCGCGTTCAACTTTCAGGGCGTGACCGTACATACCCGTACGGGCGAGCCTGACCAGACGCACATCCCCGGCTTTCCCGCCGTCGAAACCGCGAACGATGTCTCTACCGAGGTAACCCAAGGCGCGCCCATCGTGCGCACCGTGGGTAACTTGGATGCAGACGCCGTGCGCGTCACAGTGCAACTGCCTGCGCTGAACGAGCAGAACACCAGCAACGGCGATTTGGTAGGCGCATCCGTCGAAGTGGCCATCGACGTACGGCCCATGGGCGGCACATGGGCAGAGCGTAAGCGCGACACTATCGCGGGTAAAACCACCAGCCCGTACCAGCGCACCTATCGCATTGAGCTAACCGGCAGCGGCCCATGGGACGTGCGCGTTCGCCGCATTACCCCGGATAGCGACGCGGCCACGCTGAACAACGCCACCTATTGGGCCACCTACACCGAAGTCATCGACGCCAAGCTGAGCTACCCGGACACCGCCCTGGTGGCCCTGGAAGTAGACGCCCAGCAGTTCGGCAACCAGATCCCCGCCCGTAGCTACGACGTAAAAGGGTTGATCATTCGCGTGCCGGATAACTACGACCCGGCAACCCGCAGCTATAGCGGCTTTTGGGGCGGCAACTTCAAGCTGGCGTGGAGTGATAACCCGGCATGGTGCTACTACGACTTAGCCACTAAAACCCGCTACGGGGCAGCACTGGCCAACGTCGATAAGTGGGCGCTGTATCAGATCGGCCAATACTGTGATGAGTTGGTGCCGGACGGTTTCGGTGGCGAAGAACCGCGCTTTACGTTTAATACGGTGCTGGCGAGCCAAAAAGAGGCCATTACCGCGCTGCATACCCTCGCCAGCGCGTTTCGTGGCATGACCTATTGGGGTACCAACACCGTCATGCCGGTGGCCGATATGCCCGCCGACCCGGTGAAGCTGGTCACGCCTGCCAACGTGATCGACGGTGAGTTTGTTTATGAAGGCACTGGGCTGAAGGCACGCCATAGCGTCGCTATGGTGAGTTACAACGACCCCAACGATAACTACCGGCAGCAGGTGGAAGTGGTCGAAGATGCCGAGGCTATCGAGCTGTACGGCTGGCGACCGCTGGAAATTAACGCGGTGGCCTGTACCTCACGCGGGCAGGCCCACCGGCTGGGCAAATGGACGCTGGCCAGCGAGCGCGCCGAAACCGAAACCGTGAGCTACCGGGCGAGCCTGGACCATGCCGACGTTCGCCCCGGCGATATTATCAGCGTTTCCGACCCGACCACCGCCGGGGCGCGGCTGGGCGGTCGCATCGTGGCCACCGGCACTGAGGCGCTGACGCTCGATAACGTGCCGGAACAGGCCAGCGGCGCTAACTGGTTTTTAGATGTGATGCTGCCCAGCGGGGCAGTGGAACGCCGCGCCGTGGCATCGTTTAACGGCGATGAAGTGGCGTTGGCTAATCCGCTATCCGCGCCGCCCATCGTGGGCGCGGTGTGGATTCTATCGAGCCAAGCCGTGGAGCCCCGGCGCTTTCGGGTGCTAGCCAACATCGAAGAGGCGGCGCGGGTGTATCACATCACCGCGCTGGAGCACGACCCGACCAAATACGGCCGCATCGAGCTAGGGCTAGACCTGCCGGAGCCGGACTACTCGCTACTGCCCACCGGCCCGGTCGTGGCCCCGTACAGCCTCACCGCGCAGGCGTTTACCTATCTGGCGGGTGGCACTGAACACCAAGGGATGACGATTAGCTGGACGCCCAGCGACGACCCCCGCGTTTTGCGTTACATCGTGGAAGTGCAGGGGCCTAGCGACCTGCGTTGGCGCACGGTGTACACCGAAAGCGGCACCAGTGTGGACCTGCGCGACGTGGAGCCGGGCCAGTGGATGATTCGCGTGCGTGGGGTCACGGGCATCGGCACCGCCTCGCCATGGGCCGCGCTGACCACCAACATCGCGGGCCTGCTGCTGCCGGTGCCCCCGGATAGCGTCGATATTGAGGTGGGTACCTTCACGATCACGTTACGCCCACGCGGGGCGTATCCGGGGCAGATGTTCGAGTTCTGGCGGTCTAACGTTGCCTTGGCGTTGAACCAGATCACCAGTAACGCGGTGCGCCTGACCGTATCCACCGACCTCACCGACACCGAGCTAAGCCCCGGCACCACGTATTACTACTACGTGCGCGGTGCCAACGCTTATGGGGTGAGCAGCTGGTACCCGGTACAGGCCACCACCGACACCACTCCCGAAAAACTACTGCAAGCGCTAAGCGACAGCATCCGCGAAAGCGAGCTAGACCAAGCCCTCCAACAGCGTATCGACAAAATCGACGGCCCCGAAACGCTACCCGGCAGCGTTGCCCAGCGCATCGCCGCCGAAGCCGAGCAGCGTAGCGAGGAAGTCGAGACGGTGCGCGGCGAGCTGGTCGACGGCTTTGAAGCCGAAGCCCTGGCCCGTACCCAAGCCATCCAGCAGGAAACCGACAACCGCACGGTGGCCATCACTCAGCTAAGCGAGCAGGTGGAGACTGAGTTCGGACTGCTGGGGTTAGAGATCAACGCCATTGCAGCGGCGTACGATGCTACTGCCGCCTCTATCTACACGATGACGCAGATCCGCATTAACGAAGCGGAGGTGGTCGCTACTCAGATCAATCAGCTGAGCGGGCGTGTAGAGGACAACGAATCGCTGATCCTCGACGAGCGGCAGATTCGTACCAACCAATACAGCTCGCTGGCCACCCAGGTCGGCATCCTCTCAGCGCGGCTGGATGCCCGCCCATCGCTTAACTCAGGCTTTGAACCGGGTGCGGATTTTGATGCGTGGAGCGCGACCAGCGGCAACGCCATTAGCGCGGTCACCAGCGGCGTCTACAGTGGTCTGCAATCTGCGTTGGTCACGTCCACCACCGCAAGCGCGAACCCCAACAACGGGGGCGTGCGTCGCATCATCGCCCCGGAAACGGCAGCGGAGTTTGCGGGGCATGAGATCCGCTTAGCGGTGTATGCCAAACAGCCCGCCACCGGCGCGGCCGCAGAGTTCGCCATGGCGTATCAGATAGCCGGGCAGTCGGTGCAGTGGCAGCGGTTCACGCCGACGGCTGAGTGGGCGTTTTATGACGTCGTGATCGACGTACCCGAGGTCACCGGCGGCGCGCAGCACGCCGTCGCTATTTGGGGCAGCACTGCCGGGGGCGGCAACGGTGTGCAGGTCGACCGCCTGTTAGTGACGTTCGCGGAGACGGACATTCCCGAGGTCACCGCCGCTATCGAGCAGATCCAACAAGCGCTAGTCGATCAACAGCAGGCCGTGGCGCAAGAGCTGAGCGGTTTTGAAACGCAGCTCAACAGCAACACGTCTGCCATCCAGCAGGAGATCACGGCGCGCACCACGCTAACGGATTCATTCGCCACCAGCATTCAAACGCTGCAAACCCAAACCCAAAACAACGCCGCGGCGATTATTGCCGAACGTGACGCGTGGAGTAGCGAAACCGACGCCCTCGCTCAGCAGATCGAGCAGCTGGTGGCCGATTTGGGCGACGGTGGGGCAGCCTCGCTTGAAGAAGAACGGCAAGTGCGGGCGAGTGAAGACGAGTACCTAGCATCTCTTCAACGGGTGCTCGCTGCCGCTGAGGGGGTTAGTTCTGCCGCTTATCAGTTCCAGACCACTACCCGCATCACCGCCGAAGAAGCCGAAGCGCGCCGTAACGAGCAGCTGCAAGCTCAGATAGGCGACACCCAGGCCGCCATTCAGAACGAAGCCACCGTTCGCGCCAATGCCGATAGCGCGCAAGCGTCGCAGATCAGCGCCCTACAAAGCGCTGCCAGCGGCAATGCCGCCTCGATTCAACAGGAGGCCAACACGCGGGCAAGCGCTGATAGCGCACTGTCGCAGCAGATCAACACCGTTCAAGCGGCGTTTGACGACGAGCTGGCCAGCGTTCAGCAGGCTACCCAAGCGCAGTACAACCAGACCACCCAGCGTTTGGAGGCCATGTGGACGCTACGCATCGACAACGGCGGACGGGTGTCGGGGATCGGTCTTGGAGATGACGGCGAAGAAAGCCTACTGGGATTCCGCGCCGACCGTATCTACTTCGCCCACCCCAACAGTGGTGACGAAGTTTTCCCGATGGTACTGGATGGCGGCTCGGTCGTGATGAACGACGCACTGATCAACAAGCTGCTGTTCACCAAGCTGCGTAGCTCTGACGACTCTCTGGTGTTCCAAAACGGCAAGCTGCAGGCCGAGTACATCGCGGTGGATGATCTGGTCGTCAGGCAGGGGCAGTCCAGCAACTACCTGGTAGGCCAGCGCGGTTGGCGGCTGACGACCACCGGCGGGGAGATCAATTTCCCGATCCAGTTCAATAACGTACAAGGCGCGGGAGCCTTAGCAGGGTTGGACTCGGTGGGTTACGGGGATCTGACGGGAGCTAAGCCACCCACCAATGCAGACCATACGGGCAGCAATACCGCCTTTGACACAAGTCGGGTGGCGGGCACGGCGGCGTCGACTGTGCGCGACCGCGCCAATGCTGGCAATAACGCTAACAACCGAGTGAACAACTGGACGCGCCCCGATTCTACACTAATTGACGGCAACAAGATTTTCACTGGTGATGCGTATGTCGATACGTTGCAGATCAAGGGTCAAGCGGTAACTATTCCCCTATCTGCGTACACGGGGGGAGCAATGGTAGTAGGCTCCGAGGGTGGGAATAATGATGTAGGAGGCTATCGCGACTATAAAGACATTCAAAATTTGTGGGTTCCGAGCCTACCAGGTACTACGGAGATTTTATGCTCATTTAGGGTAGTGTTCCAGATTAGTGATGGAATTGGGTACCCCGAAGTTCGGCTAGTGGAATGGAACAGTAGCAATATGACAGTACGGTATCAGTCTCGGATCGATCCAGGGCTTAATACGTTCGCTGTTGTTATACCCCCCAGACCAAACGGTCGCGCCTTCGTCCTACAACTTAGATTCGGAAGCAACGGCGCGCGTAACCCTGGTGGGCTGCAATTTCATGCAAGTAACAGGCTTATTCGTACACTTACTCTAAAGGATAATCGCTAA

Genome Context

Tertiary structure

PDB ID

1762cff622594209df3b3021a210d168093b661f77533c88f1633deecea2306a

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7348

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence