Protein

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Genbank accession
AND76103.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMTPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGNLSVGIAISPAGLATLTSTEERSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICMWGGNEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGQDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNYGAFGNTANSGYVGTRKGLDWDNRSYYTNEGFETTDPWNRDGHTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 53074,27520 Da
isoelectric point:5,47538
aromaticity:0,06890
hydropathy:-0,22028

Domains

Domains [InterPro]
DC_0176
STR
1–423
DC_0176
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 IPR037053 IPR044916
SSF69349
STR
248–333
SSF69349 IPR027448
IPR015173
STR
251–309
IPR015173 SSF88874
AND76103.1
1 508
Architecture
STR
ATT
STR
STR 1-309 | ATT 310-371 | STR 372-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage MX01
[NCBI] 		1837930 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND76103.1 [NCBI]
Genbank nucleotide accession
KU878969.1 [NCBI]
CDS location
range 88197 -> 89723
strand +
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCCACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCCACAGAAACATCCCAAGGTATTATTCGTCTGGCCACAACACAAGAAGTAATGGATGGATTGGATGCTTATAGTGCAGTGACCCCAGCAACTTTAAAAGCCCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTACGCTACTAACGCTGAAGCCATTGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCCACAGGCGTTATCAAGATTTCAACTACACCTGCTGCATTAGCTGGTACCGATGATACCACAGCGATGACCCCACTTAAAGTATCGCAAGCAATTGGTGCAGCGACAGCGGCATTACCGGTTTATTCTACGGCAACGACTACAAATGAAGGTCTAGTTCGTTTAGCGACTAATGCCGAAGTTGGTAATGGAAATCTTTCTGTAGGTATCGCTATTTCTCCAGCAGGATTGGCCACATTAACTTCCACCGAAGAACGAAGCGGTATTATTAAACTCGCCGGTTGGGATATGGTATCTAATGGCACCGACCACACCGCCGCTGTTACACCTGCTTCTTTGTTAGCTCGTACAGGTAATACCGGACGTATTGGGTTGGTTCGATTATCTACTACAGTAGGTCAAGGTGATGGTAATACGGCACTGGCTTATAATGCCAACGTTATTTCTACTTCAGGTGGTGAAATATGGGGTACTTTAAACGTTAATGGCGCATTACGTCGTAATGGTGTTGATGTTGTTACCCACGACCAATTATCAGATAGTGTTCCGGTCGGTACTATTTGTATGTGGGGCGGCAATGAAGGTAATATCCCTGGCAAATGGCGTGCTTGTGTAGGTGGGACTTACACTGGTGGTGCATATTTAAATGCTGTTGGTGGACGTTGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGTGGCGCTAATATGGTTGGTGGATATTCTGAAGGTGAAGTTAACCCACATATTGCTGGTAACCGAGGACAAGACGGTAAAGGTAAGGCCCGTTTAGGCAACGGTGTTGGTTCGTTCCCACAATCTTCTGTTCAAGCCCAAGCGTTACGTTACCATAAACACGCCGGCGGTTTTGGTGAACATGATAACTATGGCGCTTTTGGCAACACAGCTAACTCCGGATATGTTGGCACTCGTAAAGGCCTTGACTGGGATAACCGTAGTTATTATACCAACGAAGGTTTTGAGACCACCGATCCTTGGAACCGTGATGGACATACCACATTGAATAGTGAAGGTCTTATTGCCAACGAAACACGTCCATGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5499ac7b3ea1e472aa3a2197a27daf96137ae32484de74254e8d281eb0dc8384
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of T4 like phage of avian pathogenic Escherichia coli Chen,M., Xu,J. and Zhang,W. 2021-08 — GenBank