Protein

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Genbank accession
XEO41410.1 [GenBank]
Protein name
long tail fiber proximal subunit protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPSRAYEKGFIVEFNGRLWMAEQNIAKPAGTFFEGYWKPLRTDPKWYPFDSGKYQLKVGDYISVDTRAGLDVELTLPTSPAPQEGDTISIKDIGGLTGYTSVIVIAPVESIIDKGASIPQKRMTIPFSEWTFVYTKKQWSLFDGDEAPVARTVVPGGPIRVQSGETIIRNYDRFAPIVLTFPKFANNGDIIHFVGMNQNSVPYYHLELNTFDSNTSIMSPGIHKEIFYRSLSGYFIYNSSSSTWVLFDTDTVDRLRTVSTDTDLFPNETVTVVGKDNVTAQTIKLTLPDNVQPGDQITIALNYMRKAQTINIVPKGSDMILTNKNLTQFPKRSSYPPDGNWVNTNILSYNGNSDYPPVIKFAYIDMGPIKQWLMVDCIPALERVDPSSDATRGRLGVIALATQAQANLDKSAITAEAKEVAITPETLSNRTATEARQGIAKISTRAQNQLNTDDANYNDFDIVTPLKLNQKQATETMRGLAEIATQAETNSNTDDTRIITSKKLDGRRARTDLAGVAKLVAAGGVAPVKNGTNTRDTAGTGIYDHSDYVNIVTPKTLREFYSTEMALGTVYLANSAEVISGAASVAKYPLAVTPETLHTKTATDGRIGFTQVANQTEVNAGTDYFKYVTPKTLNDRKATEALTGIAKLATQAEFNAGTAGLISGPDKIKAYLSTPSRTAVVAASGLTQAGNLWTTTTFDIVAPTETQRGTTRLATQTEVNAGTDDITVVTPKKLHAKKATTAAEGIIRIANTAETIAGTSGTTAVCPVNLKQVIQVETSWEASASLRGPVKISSGSITFVGNDTVGSTADIETYAKSGYAISPYELNKTLVNYMPLKAKAIDSDKLDGIDSTQFIRRDINQTVEGSLTFTSPTLFNDRVDVREMLEVGKTSGESLNTDNGKLRMVSGAVAPRAWAFAIHDGNVNGVGSSTLKFGYKYLSAQPGPIDIVAYEIHHSGAIKFNNTLNVVGATTINNTLNVSGIVSTDSVGFRIAGFDALTAVSGQTKVGTTTRGLDLIATDAAFIRALDSGTVYTVMTTKNRAAILDPLYVKKSGDTMTGRLNVSQPITATIPQSLATPNAVPNSNNFGTWTIDITDPAIYNTMRPYLVGVYAKNEETGATLPWYDKYDEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWSRQWNPATNRWDGWGRMFTNNHPPLPQDIGAMSNNGSVFDSMRIRDWIQIGNLRIYANPETKTVRFDWIE
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 140274,97650 Da
isoelectric point:5,96493
aromaticity:0,08359
hydropathy:-0,28406

Domains

Domains [InterPro]
DC_1986
ATT
7–135
DC_1986 DC_1209
IPR036240
STR
83–204
IPR036240 IPR048391
XEO41410.1
1 1292
Architecture
ATT
STR
STR
ATT
STR
ATT 7-135 | STR 136-204 | STR 345-1130 | ATT 1131-1240 | STR 1241-1280 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEO41410.1
1 1292
Domain Start End Length (AA) Confidence
N-terminal 1 985 985 0,7196
Central domain 986 1184 200 0,2217
C-terminal 1185 1292 107 0,6866
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-985
Central
986-1184
C-terminal
1185-1292

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_DLP3
[NCBI] 		3243735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii AB5075
[NCBI] 		1116234 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEO41410.1 [NCBI]
Genbank nucleotide accession
PQ034586 [NCBI]
CDS location
range 149465 -> 153343
strand +
CDS
ATGTCTGAAGTAAAAACAAGTTTCCGTGCGTCATACGGGTTGGACGCAGCCGGTGAAAAAGTAATCAATGTAGCAAAAGCTGACAAAACTGTCATGACTGATGGTGTAAACGTTGAATACCTCATCCAAGAAAACACAACCCAACAATATGATCCTTCTCGTGCATATGAGAAAGGATTTATTGTAGAATTTAATGGCCGACTTTGGATGGCCGAACAGAATATTGCTAAACCTGCAGGAACATTCTTTGAAGGTTACTGGAAGCCATTGCGTACCGACCCTAAATGGTACCCATTTGATTCTGGCAAGTATCAATTAAAAGTTGGTGATTATATTTCTGTTGATACACGTGCAGGTTTAGACGTAGAATTAACTTTACCAACATCCCCAGCACCACAAGAAGGCGACACTATTTCCATTAAAGATATTGGCGGCTTGACTGGGTATACTTCTGTTATTGTTATTGCCCCTGTTGAATCTATTATTGATAAAGGCGCAAGCATCCCACAAAAACGTATGACTATTCCATTTTCTGAGTGGACATTTGTTTATACGAAGAAGCAATGGTCATTATTCGACGGTGACGAGGCACCTGTGGCTCGCACAGTTGTACCAGGGGGACCAATTCGTGTTCAATCAGGTGAAACAATTATTCGTAATTATGATCGCTTTGCGCCTATTGTGTTGACATTCCCAAAATTCGCTAATAATGGCGATATTATCCACTTTGTAGGCATGAATCAAAATTCGGTACCATATTACCACCTAGAATTGAACACATTTGATTCTAATACAAGTATAATGTCTCCTGGCATACACAAAGAGATATTCTATCGTTCACTAAGTGGCTATTTTATTTACAATAGCTCATCGTCTACTTGGGTACTTTTTGACACAGATACAGTAGATCGACTACGAACTGTTAGTACTGATACTGATTTGTTCCCTAATGAAACTGTCACAGTAGTCGGCAAAGATAACGTAACCGCGCAAACAATTAAATTGACTCTGCCTGATAATGTGCAACCTGGTGACCAAATCACTATTGCATTGAATTATATGCGAAAGGCTCAAACAATTAATATCGTCCCTAAAGGGTCTGATATGATTTTGACTAATAAAAATCTTACACAGTTCCCTAAGCGTTCGAGTTATCCACCTGATGGCAATTGGGTCAATACCAACATTTTGTCATATAATGGAAACAGCGATTATCCGCCTGTGATTAAGTTTGCATACATTGATATGGGGCCTATTAAACAGTGGTTAATGGTCGACTGTATTCCTGCATTAGAACGCGTAGACCCTTCATCAGATGCAACACGTGGAAGATTAGGTGTTATTGCATTAGCTACCCAAGCTCAAGCGAATTTAGATAAATCTGCCATAACCGCCGAAGCGAAAGAAGTAGCGATTACACCTGAAACTTTATCAAATAGAACCGCTACCGAGGCTCGCCAAGGTATAGCTAAAATTTCAACTAGGGCACAGAACCAACTTAATACTGATGACGCTAATTATAACGATTTTGACATAGTTACTCCTCTCAAGTTGAATCAAAAACAAGCCACTGAAACTATGCGTGGTCTTGCTGAAATTGCCACTCAAGCTGAAACGAATAGCAACACCGACGACACACGAATTATTACATCTAAGAAATTGGATGGACGTAGAGCAAGAACAGATCTTGCAGGCGTAGCAAAACTCGTTGCTGCTGGCGGTGTAGCACCAGTTAAAAATGGCACAAATACACGAGATACTGCTGGTACTGGCATCTATGACCATTCAGATTATGTGAACATTGTAACTCCAAAAACATTAAGAGAATTTTATTCTACAGAAATGGCTTTAGGTACAGTGTACTTAGCAAATTCTGCTGAAGTTATTTCTGGTGCTGCATCAGTAGCGAAGTACCCATTAGCTGTTACTCCAGAAACATTGCACACAAAAACTGCTACAGATGGTAGAATCGGTTTTACCCAGGTTGCGAATCAAACCGAAGTTAATGCCGGCACCGATTATTTTAAATATGTTACGCCAAAAACATTAAATGATCGTAAAGCTACAGAAGCTTTGACTGGTATTGCTAAACTCGCAACTCAAGCTGAGTTTAATGCTGGTACTGCAGGGCTAATCTCTGGTCCAGATAAAATTAAAGCATATTTGTCTACACCTTCACGCACTGCAGTAGTTGCAGCATCCGGTTTGACTCAAGCTGGCAACCTTTGGACTACAACAACATTTGACATTGTTGCACCTACTGAAACACAACGTGGTACAACACGATTAGCTACTCAAACTGAAGTTAATGCCGGCACCGATGACATCACTGTTGTTACTCCTAAAAAGTTACATGCTAAAAAGGCTACAACTGCTGCAGAAGGTATTATTAGAATTGCTAATACTGCAGAGACTATAGCTGGAACTTCTGGCACTACCGCTGTATGTCCAGTAAACTTAAAGCAAGTAATACAAGTCGAGACGTCTTGGGAGGCTTCAGCTTCTTTGCGTGGTCCGGTAAAAATCTCTAGCGGTTCGATTACATTTGTAGGAAATGATACTGTTGGATCAACAGCAGATATTGAAACTTATGCTAAGTCCGGATATGCGATTTCACCATATGAGTTGAATAAAACTCTTGTGAATTACATGCCATTGAAAGCTAAGGCTATAGATTCCGATAAATTAGATGGAATTGACTCTACTCAGTTCATCCGTAGAGATATTAATCAGACTGTTGAAGGAAGTTTAACATTCACTAGTCCTACATTGTTTAATGATCGTGTTGACGTACGTGAAATGTTAGAAGTGGGCAAAACTTCAGGTGAATCACTTAACACAGACAATGGCAAGCTACGTATGGTTTCTGGTGCTGTAGCTCCTCGAGCTTGGGCATTTGCGATACATGACGGTAATGTTAATGGTGTTGGCTCATCTACACTTAAATTTGGCTATAAGTATCTTAGCGCTCAACCAGGTCCTATTGACATTGTTGCATATGAAATTCATCATTCCGGTGCAATTAAATTCAACAATACTTTAAATGTAGTTGGTGCGACGACAATAAACAACACACTAAATGTTTCAGGTATCGTAAGTACAGACTCTGTCGGATTCCGAATTGCTGGATTTGATGCGTTGACGGCAGTCTCAGGACAAACTAAAGTAGGTACTACTACACGTGGTTTAGACTTGATTGCAACTGATGCTGCATTTATTCGAGCTTTGGATTCAGGCACAGTATATACTGTAATGACAACAAAAAATCGTGCAGCGATTTTAGATCCATTGTATGTCAAAAAGTCTGGTGACACTATGACTGGTAGATTAAACGTCAGCCAGCCTATTACTGCTACAATTCCTCAGTCTTTAGCTACGCCTAATGCTGTACCTAATTCTAACAACTTTGGTACATGGACAATTGATATTACTGATCCTGCAATTTATAATACTATGCGTCCGTATCTTGTAGGTGTCTATGCCAAAAATGAAGAAACTGGTGCTACACTACCATGGTATGATAAGTATGATGAATTCAACGGACCTGGTACGTTGTCTCAATTTGGATCATCTGCGTCTAATGGCTCAGGTACATATCAAATTTGGGCCCCACGTCCGCCAGCAGATAAAGCAAATCTTCCTGGACATATTGCAGGAACTATGTGGTCCCGTCAATGGAATCCTGCAACAAATCGCTGGGATGGCTGGGGTAGAATGTTTACAAACAATCATCCGCCGTTACCACAAGATATTGGTGCTATGAGTAACAATGGTTCAGTCTTTGATTCTATGCGCATCAGAGATTGGATACAAATCGGCAATTTAAGAATCTATGCGAATCCAGAAACAAAAACTGTTCGCTTTGATTGGATAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
255a6830dd8c3b3afa64486e4f25123cc9b384fb260d29c15a861ae85d8d650b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Acinetobacter phages for therapeutic use Peters,D.L. 2022-09-29 — GenBank