Protein

View in Explore
Genbank accession
XKC23868.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MGLETATYINGLVITNPDGNDGKSQGDDHLRLVKKVLKNTFPNITGAVTATQDDLNKTAIVGNFCFPGMIVAWSGAIGSIPAGWKICNGIGTISTGAPVPDLRGKFLWGSDGTTPNPIGFVSGTANINLSGTVSNTALTVAQMPAHNHIQGYGRNQTTSVTRYGFVETGISTVEDGFGFQSMSLAPLTSTTGQGEPHNHTFTVNAPLANMPPFYTVAYLIKN
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23289,96750 Da
isoelectric point:6,49149
aromaticity:0,08108
hydropathy:-0,06892

Domains

Domains [InterPro]
DC_2164
STR
2–222
DC_2164
SSF88874
STR
63–221
SSF88874
XKC23868.1
1 222
Architecture
STR
STR 2-222
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JB8
[NCBI] 		3374763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC23868.1 [NCBI]
Genbank nucleotide accession
PQ473534.1 [NCBI]
CDS location
range 11315 -> 11983
strand +
CDS
ATGGGTCTTGAGACAGCAACCTATATTAATGGGTTGGTGATTACGAACCCGGATGGTAATGATGGGAAGAGCCAAGGGGATGACCACCTGAGGCTCGTTAAGAAGGTTCTCAAGAATACCTTCCCGAATATCACCGGAGCTGTTACCGCCACCCAAGACGACCTCAACAAGACCGCCATTGTAGGTAACTTCTGTTTCCCCGGAATGATCGTAGCTTGGTCTGGAGCCATTGGCTCTATCCCAGCGGGGTGGAAGATTTGCAATGGCATTGGGACTATCTCCACAGGGGCGCCCGTTCCTGATCTTCGAGGTAAGTTCCTGTGGGGGAGTGATGGTACTACACCCAACCCGATTGGTTTTGTGTCTGGTACGGCCAACATCAACCTCAGCGGTACGGTAAGTAACACTGCTCTGACTGTTGCCCAAATGCCGGCGCACAATCACATTCAAGGGTATGGTCGTAACCAAACCACTAGCGTAACCAGGTATGGTTTTGTTGAGACTGGGATCAGCACGGTAGAGGATGGATTTGGATTCCAGTCTATGTCCTTGGCCCCTCTTACCTCAACCACTGGTCAAGGTGAACCGCACAACCACACGTTTACCGTGAATGCCCCCTTGGCGAATATGCCCCCGTTCTACACTGTGGCATATCTGATTAAGAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
992373efa41b70688648fb8163dae34ab48bd47a21fd1b3e7a4ba7243e380459
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7046
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Discovery and characterization of a novel Pseudomonas phage of a new genus Nicholls,P., Clark,J.R. and Maresso,A. 2026 41737826 GenBank