Protein

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Genbank accession
XQU42679.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKVVFNPTGSSEVTIGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNNFNIRQAIVTDGEQLTLKKATNAGASYIQGRDANNQQTWYVGQGNANNTNVYLYNHATGSMLTLDATASFNKTLRVMGQVQPSDFSNLDARYFTQTVANQRFAQLAGDNTFSGINNFVGEFKITRNNAALVIKNASNATGLYLLGVKADGTSKFYLGTDTSDSVVNLHNYSTSTTISLSDVISATKTVRITGQVQPSDWTNIDSRYIPAATLSNLAKLSDMNIFRSTQVILQDDLSLQLRNTVQDNALYFAGYNADNVRRWYIGNGEVENPSKLIIHNDKAGTTIFMQDDFFLNKTVKINGQVQPSDWANIDARYYGKSETDSKYFWSASRGLVKETEGGVAWNQPSGIYTESTSDGGAELLVLNLFCNTKASTPSAQLKFRYKNGGMWYRTARDALGFEDVWSKVYTEAQRPTPSEIGAYTKAETDQKIATAISDSTDLNKIYPVGIVTWFNSNVDPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKGTNSTGGHTHSVSGTTSAAGNHAHHLGLLLVNGGDALYGYTTVGNSLPRTLDWLDRRDNKFPNTNTTGNHTHTWSGTTSGAGDHSHSVGIGAHSHTVSGNTGSTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:795 AA
molecular weight: 86413,64820 Da
isoelectric point:7,32162
aromaticity:0,09182
hydropathy:-0,40591

Domains

Domains [InterPro]
DC_1566
STR
60–795
DC_1566
G3DSA:6.20.80.10
STR
157–218
G3DSA:6.20.80.10 G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR022246
IPR048388
ATT
158–247
IPR048388 IPR048388 IPR048388
XQU42679.1
1 795
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 60-157 | ATT 158-247 | STR 248-274 | ATT 275-361 | STR 362-382 | ATT 383-465 | STR 466-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQU42679.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 385 385 0,5164
Central domain 386 584 200 0,1636
C-terminal 585 795 210 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-385
Central
386-584
C-terminal
585-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_P54
[NCBI] 		3412730 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQU42679.1 [NCBI]
Genbank nucleotide accession
PV390658.1 [NCBI]
CDS location
range 50744 -> 53131
strand -
CDS
ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATCGACACAATCCGTTCAGATGACCTTCTTCATGTCAGAGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTTGAAAGGTTTGTTCAGATTGCTGGTAGTACCATGACGGGTGATTTAGGGATTGTTAAGTTACTTTATGGTGGTAAGGTAGTCTTTAACCCAACAGGCTCTTCTGAGGTTACTATTGGGGATGTTTTAAAGACTTTTAAAATCAACGCAAATGGCCTTAAACTGACTATTGCAGATGCTTCAAGGTCGGCAACTGTTTATCATACTCTGAATAAACCAAGCCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGATGCAAGATATGCAAGGCTGGCTGTAACAAATAACTTCAACATTAGGCAAGCAATTGTAACTGATGGTGAGCAGTTAACCCTTAAGAAAGCAACGAATGCAGGAGCTTCATATATTCAGGGTAGAGATGCTAATAACCAGCAAACGTGGTATGTTGGACAGGGAAATGCAAACAACACTAATGTTTATCTGTACAATCATGCCACTGGCTCAATGTTAACCCTTGACGCAACAGCGTCATTTAACAAGACACTAAGAGTCATGGGTCAAGTTCAACCTTCTGACTTCTCTAACTTAGATGCTAGATACTTTACTCAGACAGTAGCTAATCAGAGATTTGCACAGCTAGCTGGTGATAACACCTTTAGTGGTATTAATAATTTTGTAGGTGAGTTCAAAATTACCAGAAATAATGCTGCGTTAGTTATTAAGAATGCCTCTAATGCAACCGGACTATACCTACTTGGAGTGAAGGCTGATGGTACAAGCAAATTCTACTTAGGGACTGATACTTCTGACTCTGTAGTTAATCTGCACAACTACAGCACAAGCACAACCATCTCTTTGTCAGATGTGATTAGTGCTACTAAGACTGTGAGAATCACTGGTCAAGTTCAACCTTCTGATTGGACTAACATTGACTCTAGATACATTCCAGCAGCTACTTTGAGTAATCTTGCTAAACTCAGTGACATGAACATTTTCAGGTCTACACAAGTTATTCTCCAAGATGACCTATCGTTACAGCTAAGAAACACTGTTCAGGATAATGCACTATACTTTGCTGGTTATAACGCTGATAATGTGAGAAGATGGTACATCGGGAATGGCGAGGTAGAAAACCCATCTAAACTCATTATCCACAATGATAAAGCTGGGACCACTATTTTTATGCAAGATGACTTTTTTCTAAATAAAACAGTGAAAATCAATGGTCAAGTTCAACCCTCTGATTGGGCTAACATTGATGCAAGATACTACGGTAAATCAGAAACTGATTCGAAGTATTTCTGGTCAGCATCCAGAGGTCTGGTAAAAGAGACTGAAGGTGGTGTAGCTTGGAACCAACCTTCAGGAATCTACACTGAATCAACAAGTGATGGTGGGGCAGAACTCTTAGTCTTAAACCTGTTTTGTAATACGAAAGCCTCTACACCATCTGCACAATTAAAGTTTAGGTACAAAAATGGTGGGATGTGGTACAGAACAGCCAGAGATGCACTTGGTTTTGAGGATGTATGGTCTAAGGTTTACACCGAAGCTCAGAGACCAACCCCTTCAGAGATTGGTGCATACACTAAAGCAGAAACTGACCAGAAAATTGCAACAGCAATTAGTGACTCTACAGACCTTAATAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTGACCCTAATACAGCACTTCCTGGTCTAACTTGGACGTACCTGAACAATGGTGTTGGTAGAACTATCAGAATCGCAGCAGCAAACGGTTCAGATGTTGCTACAACAGGTGGTTCAGATTCTGTGACGTTAGCTGTTGGTAACTTACCATCACACACTCACAGTTTCTCTGCTACCACTTCATCTTTTGATTATGGTACGAAGGGCACTAATAGTACTGGTGGTCATACTCACTCTGTAAGTGGTACAACAAGTGCTGCTGGTAACCACGCTCACCACTTAGGTCTGCTATTGGTTAATGGTGGTGATGCTTTGTACGGATATACAACAGTTGGTAACAGCCTCCCTAGAACGCTTGACTGGCTTGATAGAAGAGATAACAAGTTCCCTAACACTAACACAACTGGTAACCATACACACACATGGTCTGGTACTACAAGCGGTGCTGGTGACCATTCCCACTCTGTAGGTATTGGTGCTCACAGCCACACAGTTAGTGGTAACACTGGTAGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTATAAGTTAATGGCTTGGGTAAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0d5c279c1265edf23e890851e1821ea52c3a43421c53d1c01cc4af99ad0a2f7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50