Protein

Genbank accession
AJD82793.1 [GenBank]
Protein name
tail component protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MTTLLLHKDAFRPSASTEKKSLRAGVRISTLLRQEMYISGRGKSLTRRVPFVVVRNGQPVLQAQWSGRIKKGDNLSIVHLPKGGGGGSNPMQIVMTVAIAVAAAYTGGAVGAAYGVGWGAAASAAVMIGGTLLLNMFFPPETPSPMDMNREKASPTYSLTAQGNTARLLEAIPVLYGRFRTFPDLASSPYSETVGNEQYLYQLFCITQGSMEIEKLQVDKDDFATYGEIQYQVVNPGEKVTLFPDNVITSIAVSGQEMTAQQMFGPFAVSAPGVEVNHIAVDLSWPGGAYYMNDQGKFNSSTVQVQFEYQKIDDNGNALGQWEILVEKGYTFSTSTPQSVTEKVAVALGRYQVRGIRTTPANSDNKEQNKTTWTALRGYAQSHHDYGDVTLLAVIMKATNNLNQSTSRQINVIGTRKLPVWDPVNGWSLTPQPTKNPAWAAADILRNPTYGRRLPTSRINIQELYRLSQVYDSRGDEFNGVFDSTSQLWDALSKVLRVGRTVPVNYAGLVDFVRNEPKTVPTFIFQPQNMVENTFSTDYMFVDTNSTPNYVQIEYTDGNTWDVATVDCILPGTAPTVPSKVSMMGITNRAQAWREGMSMAASNRDQRRMISFTTGREGYLPRYGDLVQISHDVPQWGQSGEVLGFNPGPDDPEWGLHGELVSNEPFEFAEGSNHAIVFKKRDGSPHGPFTVVPHPDGDAKKVIVQGTSAALEEIYISDGFREELTQYQFGPTERRGIRAIALSSTPDSSGRVALTFTNYADSVHSAENGGVVPPPGPESGLPGMNPVPIVSSVTVELTPFAWQQNIVATPARGATSYEFEISQDGVSWSNLGIQSTSSMQVNLPGGVWFVRVRGIGVAIGPWASWTGMIEASALPVSQIDHVSITSQVFGINLEWAVREDDFLAESVEIYWGTTNILGNASKLIQLPLPANKFAVTDLGPGQKRYFWFRVIDEAGRVGPWYNAGVGLLGSSSDQADIIMEYLDGKITETQLAQALIAKIESGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNEGVLESQVLVLADRFAVGRSDDETGTFKSMFIIDNGNVYMDTAFIKNGTITNLMIGDIIQSNDFVSGVSGWRLHKGAQGLEMNGTGNGYRVRLTNTGLYVWNTNTGVLCVEVGLLT
Physico‐chemical
properties
protein length:1160 AA
molecular weight: 126004,49230 Da
isoelectric point:5,25371
aromaticity:0,09052
hydropathy:-0,18302

Domains

Domains [InterPro]
NF040662
273–764
NF040662 IPR015406
IPR055385
274–379
IPR055385 IPR032876 IPR053171
AJD82793.1
1 1160
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage JWX
[NCBI] 		1589746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter xylosoxidans
[NCBI] 		85698 Bacteria > Proteobacteria > Betaproteobacteria > Burkholderiales > Alcaligenaceae > Achromobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJD82793.1 [NCBI]
Genbank nucleotide accession
KP202969 [NCBI]
CDS location
range 20228 -> 23710
strand +
CDS
ATGACGACGCTCCTGCTGCATAAGGACGCCTTCCGCCCCTCGGCAAGCACAGAAAAGAAGAGCTTGCGAGCTGGGGTGCGTATCAGCACCTTGCTCCGGCAAGAGATGTATATCTCTGGCCGAGGCAAGTCCCTCACCCGCCGAGTGCCGTTTGTCGTGGTTCGGAATGGTCAGCCTGTGCTTCAAGCTCAATGGTCGGGCCGAATCAAGAAGGGGGACAACCTGTCGATCGTGCACTTGCCTAAGGGCGGTGGCGGTGGCAGTAACCCCATGCAGATCGTCATGACCGTGGCCATCGCTGTCGCCGCCGCCTATACGGGTGGCGCTGTTGGTGCAGCATACGGGGTTGGCTGGGGCGCTGCGGCTTCCGCTGCCGTCATGATTGGTGGCACCCTGCTCTTGAACATGTTCTTCCCGCCGGAGACGCCGTCGCCGATGGATATGAACAGGGAAAAGGCAAGCCCCACCTATTCCTTGACAGCACAGGGCAATACCGCGCGGCTGCTCGAGGCCATACCAGTGTTGTATGGCCGCTTTCGCACGTTCCCAGACTTGGCATCGTCGCCGTACAGCGAGACTGTTGGCAATGAGCAGTACTTGTACCAGCTCTTCTGCATCACGCAGGGCAGCATGGAAATTGAGAAGCTCCAAGTCGATAAGGACGACTTCGCCACGTATGGTGAGATTCAGTACCAGGTTGTGAATCCTGGTGAGAAGGTCACTCTGTTCCCAGACAATGTTATCACCAGCATTGCAGTCAGTGGCCAAGAGATGACCGCCCAACAAATGTTTGGTCCTTTTGCGGTCAGTGCACCCGGCGTTGAAGTCAACCACATTGCTGTCGACTTGTCGTGGCCGGGTGGTGCCTATTACATGAATGACCAGGGCAAGTTCAACTCGTCCACGGTCCAAGTGCAGTTTGAGTACCAGAAGATCGACGATAACGGGAACGCTCTCGGCCAATGGGAAATCCTCGTTGAGAAGGGCTATACCTTCTCGACCAGCACGCCCCAAAGTGTCACGGAAAAAGTTGCCGTGGCTCTCGGTCGCTACCAGGTGCGAGGCATCCGTACTACGCCGGCAAACTCGGATAACAAGGAGCAGAACAAGACAACTTGGACTGCTCTGCGTGGCTATGCCCAGTCACATCATGACTATGGTGACGTCACTTTGCTCGCGGTCATTATGAAGGCCACTAACAACCTGAACCAATCGACGTCGCGCCAGATCAACGTCATAGGTACGCGCAAGCTGCCAGTTTGGGACCCAGTCAACGGCTGGTCGCTGACCCCTCAGCCTACCAAAAACCCTGCTTGGGCTGCCGCGGATATTCTGCGTAACCCAACGTACGGTCGTCGGCTGCCGACGTCGCGTATCAACATCCAAGAGCTGTACCGCCTGTCACAGGTGTACGATTCGCGCGGTGACGAGTTCAACGGGGTCTTTGACTCCACGAGCCAATTGTGGGATGCACTGTCGAAGGTGTTGCGCGTGGGTCGGACTGTACCAGTCAACTACGCGGGCCTTGTCGACTTCGTACGCAACGAGCCCAAGACAGTGCCTACGTTCATCTTCCAGCCGCAGAACATGGTGGAGAACACGTTCAGCACTGATTACATGTTCGTGGATACCAATTCGACGCCCAACTATGTGCAGATCGAGTACACCGATGGCAATACGTGGGACGTGGCCACTGTGGACTGCATCCTGCCTGGTACTGCCCCGACTGTGCCGTCCAAAGTATCCATGATGGGTATTACCAATCGCGCGCAGGCTTGGCGCGAAGGCATGTCCATGGCCGCTTCCAACCGCGATCAGCGCCGGATGATTTCCTTCACGACTGGTCGCGAAGGGTATCTGCCACGCTATGGCGACCTGGTACAAATCTCACACGATGTTCCACAATGGGGCCAGTCAGGTGAAGTGCTGGGCTTTAACCCTGGTCCTGACGATCCTGAATGGGGTCTGCATGGCGAGCTGGTGTCCAATGAGCCCTTTGAGTTTGCAGAAGGGTCGAACCACGCCATAGTCTTCAAGAAGCGGGACGGATCGCCTCATGGGCCCTTTACGGTTGTGCCACATCCAGATGGCGATGCCAAGAAGGTTATCGTGCAGGGCACGTCTGCTGCTCTTGAGGAGATATACATTTCGGACGGTTTTCGTGAAGAGCTGACGCAGTATCAGTTCGGTCCTACCGAACGTCGTGGCATACGCGCAATCGCGTTGTCGTCTACTCCGGATTCGTCCGGTCGCGTCGCACTCACCTTCACGAACTACGCGGACAGTGTGCACTCCGCAGAAAACGGGGGCGTGGTGCCACCACCAGGGCCAGAATCTGGTTTGCCAGGCATGAACCCAGTGCCAATTGTCAGCTCCGTCACGGTTGAGCTGACGCCCTTTGCATGGCAGCAGAACATTGTGGCAACGCCAGCTCGTGGGGCTACGTCCTATGAGTTTGAGATCAGCCAGGACGGTGTCAGCTGGTCCAATTTGGGCATTCAATCGACCAGCTCTATGCAGGTTAACCTGCCTGGTGGTGTTTGGTTTGTCCGAGTGCGTGGTATCGGCGTAGCGATCGGTCCTTGGGCTTCTTGGACGGGCATGATCGAGGCATCGGCGCTGCCAGTGTCCCAGATCGACCACGTTAGCATCACTTCGCAGGTTTTTGGTATCAACCTCGAGTGGGCTGTGCGTGAAGACGACTTCCTGGCCGAGTCCGTGGAAATTTACTGGGGCACAACGAACATTCTGGGCAATGCTTCTAAGCTAATCCAGTTGCCGTTGCCAGCCAATAAGTTCGCTGTAACAGACCTCGGGCCGGGCCAGAAGCGGTATTTCTGGTTCCGGGTTATCGACGAAGCCGGCCGTGTTGGTCCTTGGTATAACGCCGGTGTCGGTTTGCTGGGCTCTTCGAGCGATCAGGCCGATATCATCATGGAGTACCTTGATGGTAAAATAACGGAAACGCAGCTCGCGCAAGCCCTCATTGCCAAGATCGAATCTGGGGGCGGTGCCGCCGTCGAGGTTGAGGCAATTCAGAACGCCTTGGCTGCAATGTATACCATCAAGACCCAGCTCACCGCAGGTGGCCGCACGGCTCTCGCCGGTATTGGTGTCGGGGTGGAAAACAACGAAGGCGTGCTCGAGTCCCAAGTCCTCGTTTTGGCAGACCGTTTTGCGGTGGGTCGTTCTGACGATGAGACTGGCACCTTCAAATCTATGTTCATCATTGACAATGGCAATGTGTACATGGATACGGCCTTCATCAAGAATGGCACTATTACCAACTTGATGATTGGCGATATCATCCAGTCCAATGACTTCGTGTCGGGTGTGTCTGGCTGGCGTCTCCACAAGGGCGCTCAAGGGCTCGAGATGAACGGCACCGGCAACGGGTACCGCGTCCGACTAACCAACACCGGCTTGTATGTGTGGAACACCAACACCGGTGTACTTTGCGTAGAAGTGGGGCTTTTGACTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f8a18a26169668b60969539b1b55e479a571199981f5e81d1b0531378cfe2e0e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2270
Evidence 0,2270
Download PDB

Literature

Title Authors Date PMID Source
Characterization and genome comparisons of three Achromobacter phages of the Siphoviridae family Dreiseikelmann,B., Bunk,B., Rohde,M. and Wittmann,J. 2017-03-29 — GenBank