Protein

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Genbank accession
YP_013606384.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALNGTKYTAFARHRLVLEWRANQNIAGNYSTISVWLYLQSMDKWGRLDAPAIGDAKVTVEGTTQTEKASSMLNAFQKKLLLAKEWRVNHNNDGSKRITIGGSYFVNVTFTDNGVPTYYGTITIPNFSVDLNRIPRRSSLNPVPTLNLPGNLPITINRQSSTFKHNLTAWVANRDNPTLSNDAHWTYLTNLNNVDTSGSFSFTVANNKTIFTALNNRTSWQGKVKLWTIGLDDVVSQERTYKIVPPMNAQASGGKITLNVGEKINVSLSNYRSDANFTYDGVFNISGLNIPIATNSAGNTMSYTLTQTDVDNILKKIPNADSSWGQVTVTSKYSGVQYRTPWTGQRIDITIPKNKYVPSINGTPTYEDTSSVSVGLTGDNQVALQGKSNIKVTIPANFATANGYSTLKTIDVSLGGTSKTVNYSNAETVVELGAPANHTSDTLIVTVTDSRGFKSNWTKHVDIYPYENPNMYFTVTRRNNFETTTDINVNSTWSPITIGGVNKNAIQSVTYATKVVGVGTYGEETALNFTANGSMVTVKNTPIELDNTNTYDVRLSITDKFSTFTRTATVKPGNPIMFIDADNRSLFLGNAFVDNNNNELRGLLEIERDKWQDRGLVGISLNNSDISAVNGIWFSTDTSDNAGEGLHFIKSGKSRNSLTWDDYDYFYMRDNGFYVNHNTNPIFEVSDTGTMTFPTKQLWKGVVYLNDIQEILPSKKLTECRNGWVLTFSAYESGAGQPWDINQVYIHKSVLNQFNTRGFRAMIGHGTTITFKYMYITDGRIGGHAGNGIGVNSGIAIREVSEW
Physico‐chemical
properties
protein length:803 AA
molecular weight: 88857,14520 Da
isoelectric point:8,73045
aromaticity:0,10212
hydropathy:-0,38294

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_013606384.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,0632
Central domain 141 388 249 0,7953
C-terminal 389 803 414 0,4938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-388
C-terminal
389-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_EfaM_Ef2.3
[NCBI] 		2546634 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_013606384.1 [NCBI]
Genbank nucleotide accession
NC_135148 [NCBI]
CDS location
range 74389 -> 76800
strand +
CDS
ATGGCTTTAAACGGAACAAAGTATACAGCCTTTGCCCGACATAGATTAGTTTTAGAGTGGCGCGCAAATCAAAACATTGCAGGGAACTACTCAACAATCAGCGTATGGCTATATCTACAATCTATGGATAAATGGGGGAGACTTGATGCTCCCGCTATTGGTGATGCCAAAGTTACCGTAGAAGGAACTACACAGACAGAAAAAGCTTCCTCTATGTTAAATGCTTTCCAAAAGAAACTATTACTAGCTAAAGAGTGGAGAGTTAACCATAATAATGACGGTTCTAAAAGAATAACTATTGGGGGTAGCTACTTTGTAAACGTTACTTTTACTGATAATGGTGTACCAACATATTACGGTACGATAACTATACCTAACTTTTCAGTAGACCTGAATAGAATACCTAGAAGAAGTTCATTAAACCCTGTCCCTACATTAAATTTACCGGGGAACTTACCAATAACAATAAATAGGCAGAGCTCCACATTCAAACATAATCTAACTGCTTGGGTGGCTAACAGAGATAACCCCACATTAAGTAATGATGCCCATTGGACGTACTTGACAAATCTTAATAATGTAGACACTAGTGGGTCATTTAGTTTTACAGTAGCAAATAACAAAACTATTTTTACTGCATTAAACAATAGGACTAGTTGGCAAGGCAAGGTTAAACTATGGACTATAGGGTTAGATGATGTAGTTAGTCAGGAGAGAACATACAAGATTGTCCCCCCAATGAATGCACAAGCATCGGGAGGTAAGATAACCTTAAATGTGGGAGAGAAAATCAATGTATCACTAAGTAACTATCGGTCTGATGCAAACTTTACTTATGATGGGGTATTTAACATTAGTGGGCTCAACATACCCATTGCTACAAATTCAGCAGGGAACACAATGTCGTATACACTAACTCAAACAGATGTAGACAATATATTGAAGAAAATACCAAATGCGGATTCCTCGTGGGGTCAAGTAACTGTAACAAGTAAGTATAGTGGAGTACAATACAGGACTCCATGGACAGGACAGAGAATAGATATAACTATACCTAAAAACAAGTATGTACCAAGCATTAATGGTACCCCTACTTATGAAGATACAAGTAGTGTCTCTGTCGGGCTTACAGGTGACAATCAGGTAGCTCTTCAAGGTAAGTCTAATATCAAAGTGACTATCCCTGCTAACTTTGCAACGGCTAATGGTTACTCTACTTTGAAAACAATTGATGTGTCTTTAGGCGGTACATCAAAAACAGTCAACTATTCAAATGCAGAAACAGTTGTAGAGTTAGGGGCTCCCGCTAACCATACATCAGACACCTTAATAGTCACAGTAACTGACAGTCGTGGGTTTAAGTCTAACTGGACAAAGCATGTAGACATTTACCCCTACGAAAACCCAAATATGTACTTTACAGTCACACGTAGAAATAACTTTGAGACAACTACAGATATTAATGTTAATAGTACATGGTCTCCTATCACTATAGGTGGTGTAAATAAAAATGCTATCCAATCAGTGACCTATGCAACAAAAGTAGTGGGTGTTGGCACTTATGGAGAAGAAACTGCTTTAAATTTTACAGCTAATGGTAGTATGGTAACAGTAAAAAATACACCAATAGAATTAGATAATACTAATACATACGACGTCAGGTTAAGCATAACTGATAAGTTTAGCACGTTTACTAGAACAGCTACTGTTAAACCGGGTAACCCTATCATGTTTATTGATGCCGATAATCGAAGTCTGTTTTTAGGTAATGCCTTTGTTGACAATAACAATAATGAGCTAAGAGGCTTATTAGAGATAGAAAGAGATAAGTGGCAGGATAGGGGTTTAGTAGGAATATCATTAAACAATAGTGATATATCAGCAGTCAACGGTATATGGTTCTCAACAGATACCTCAGATAACGCAGGTGAAGGGCTCCACTTTATTAAATCAGGTAAATCAAGAAATTCATTGACTTGGGATGATTATGATTACTTTTATATGAGAGATAACGGGTTCTATGTTAACCACAATACTAACCCTATATTTGAAGTTTCTGACACTGGTACGATGACGTTTCCTACTAAACAGCTTTGGAAAGGGGTTGTCTATTTAAACGATATACAAGAAATTTTACCTAGTAAAAAACTGACAGAATGCCGAAACGGATGGGTTTTGACCTTCTCAGCATATGAGTCAGGTGCGGGGCAACCTTGGGATATAAATCAGGTATACATCCACAAGTCTGTGTTAAACCAGTTTAATACAAGAGGATTTAGGGCTATGATAGGTCATGGAACTACGATAACATTTAAATATATGTATATAACTGACGGTCGTATAGGTGGACATGCTGGCAATGGTATAGGAGTTAACAGTGGCATTGCCATAAGGGAGGTATCAGAATGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
249112e6a3a1814337161c84cf2f85a4ee79a457ccc3753ec27a47217f8e0de0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages that Target Cytolytic Enterococcus faecalis Reduce Features of Ethanol-induced Liver Disease Fouts,D.E., Duan,Y., White,R.C., Nguyen,K., Singh,I. and Schnabl,B. 2025-05-06 — GenBank