Protein
View in Explore- Genbank accession
- UPO63085.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFIRNNIPYWLLCSEKRLYLADGTTIIDVSPGPYSASVTNRWSVGSFNGVIFANDGVNPPHHLPPTESVFRVLPNFPANTTFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWDWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVWGEGSYNPAKSSMIFTSFQDAKLFLFGETSTFSGQSFTSTLERSDIYLGDDRMMKTVSAVIPHITGNGVCNIWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFASAGDWYFNGYTLEMAPKAGMR
- Physico‐chemical
properties -
protein length: 513 AA molecular weight: 57429,87710 Da isoelectric point: 5,60503 aromaticity: 0,12865 hydropathy: -0,30312
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
513
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 374 | 374 | 0,7592 |
| Central domain | 375 | 502 | 129 | 0,0886 |
| C-terminal | 503 | 513 | 10 | 0,9951 |
Note: Constraints were applied during segmentation.
Fixed 113 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 113 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-374
1-374
Central
375-502
375-502
C-terminal
503-513
503-513
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Pseudomonas phage ZCPS1 [NCBI] |
2936917 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UPO63085.1
[NCBI]
Genbank nucleotide accession
ON156559
[NCBI]
CDS location
range 9681 -> 11222
strand +
strand +
CDS
ATGGCCCTAGAGAGACAAGAGGTCAAGAACCCAACGGGTATCGTGACTGATATTGCACCCGCTGACCTGCCCCTGGATAAATGGTCCTTCGGGAACAACGTCCGGTTTAAGAACGGTAAGGCTCAGAAGGCTCTGGGCCATTCCCCCATCTTTGATACTGCCCAGGCCCCTATCTTGGATATGTTCCCCTTCATTCGGAATAACATCCCATACTGGCTCCTGTGCTCAGAAAAGAGGCTTTACCTGGCAGATGGGACTACCATCATTGATGTGTCCCCAGGTCCATACTCTGCGAGTGTAACCAACCGGTGGTCTGTAGGTTCCTTCAATGGAGTTATCTTTGCTAACGATGGGGTTAACCCTCCCCACCACCTACCACCAACTGAGAGTGTGTTTAGGGTTCTACCTAACTTCCCAGCGAATACAACCTTTAGACGTCTTAAGTCCTTCAAGAACTTCTTGATTGGGTTGAATGTAACGTCTAACTCTATTGAAATGCCCCAGATGGTCTGGTGGAGTACCTCAGCTGATGCTGGTGGTGTCCCGGCCTCTTGGGACCCAACGGACCCTACCAAAGATGCTGGACAGAACACCTTGGCTGATACCAATGGTGCTATCGTGGATGGTGTGAAGCTTCGTGACTCCTTCATCATCTACAAAGAAGACTCTGTATACTCCATGCGATATATTGGTGGTCTGTACATCTTCCAATTCCAGCAACTGTTTAATGACGTAGGTATCCTTGGTCCTAACTGCGCTATAGAGTTTGATGGTAACCACTTTGTTGTAGGTCATGGTGACGTCTATGTCCACAACGGTGTACAGAAGCAGTCCGTGATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATCAACCCGGATAACTACCAACGAACCTTTGTGCTAGCTGACCATGTGAATACTGAAATGTGGGTATGCTACTCCTCGACTCGATCTGAGCCTGGGAAGCATTGCGATAGGGCTATCATTTGGGACTGGAAGGAGAACACTTGGAGTATCCGAGACCTCCCCAACGTCCTCAGTGGAGCCTATGGCATCATTGACCCTAAGACTTCTAACCTCTGGGATGACGACTCCAACCCCTGGGATACCGATACGTCGGTCTGGGGTGAAGGTTCGTATAACCCAGCGAAGTCTAGTATGATCTTCACGTCCTTCCAGGATGCTAAGCTCTTCCTCTTCGGGGAGACTTCTACGTTCTCTGGACAATCATTCACGAGTACCCTTGAGAGATCAGATATCTACCTTGGGGATGACCGAATGATGAAGACCGTCAGTGCTGTTATACCTCACATTACAGGCAATGGAGTATGTAATATTTGGGTAGGTAATGCCCAGGTACAAGGCTCAGGTATCCGATGGAAAGGGCCTTACCCGTACCGTATTGGGCAGGACTATAAGATTGACACCAAGCATGTGGGCCGGTACATTGCCTTGAAGTTTGACTTCGCCTCAGCAGGTGACTGGTACTTCAATGGATATACTTTGGAAATGGCCCCGAAGGCAGGTATGCGATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
1d8e6c3343b53031f130adec6757e738b7150c60ac0ee338d7f23907571d2f10
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50