Protein

View in Explore
Genbank accession
YP_004678793.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MAIVSGSVIVADPAAPATKVVQPTSGTVFTSPGPGGPQGDASEVPGPPNVLTVGSVTSGPTPSAEIVGESPEQVLNLVLPKGDKGDTGDDSVVPGPPGPANSLSIGTVSEGDAAANVTGSAPEQVLNLVLPRGPQGEVGPPGEVSEAELNAAISAVLDQVIDGSPGALDTLNELAEALGNDPNFAATVTAQIAEKADKLRQIIAGAGLTGGGTLEADRTLAVDFGTGTNQAVRGDDVRLSNARTPTSHQHNASDINAGTLDIARLPSTVMRGWSIVSQSTAPSGAPSTQITIRTG
Physico‐chemical
properties
protein length:295 AA
molecular weight: 29174,87980 Da
isoelectric point:4,23186
aromaticity:0,01356
hydropathy:-0,08678

Domains

Domains [InterPro]
DC_1251
STR
4–295
DC_1251
YP_004678793.1
1 295
Architecture
STR
STR 4-295
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GTE2
[NCBI] 		981323 Uroviricota > Caudoviricetes > Emalynvirus >
Host Gordonia terrae
[NCBI] 		2055 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004678793.1 [NCBI]
Genbank nucleotide accession
NC_015720 [NCBI]
CDS location
range 21320 -> 22207
strand +
CDS
ATGGCTATCGTGAGTGGATCGGTCATCGTCGCTGATCCCGCGGCGCCGGCAACGAAGGTCGTTCAGCCGACCAGCGGCACGGTGTTTACGTCACCCGGGCCTGGGGGTCCTCAAGGAGACGCCTCAGAGGTCCCTGGGCCTCCTAACGTGCTCACTGTCGGCAGTGTCACCAGCGGCCCCACACCAAGCGCTGAGATCGTCGGTGAGAGCCCAGAACAGGTGCTCAATCTCGTACTGCCGAAGGGTGACAAGGGAGACACCGGTGATGACTCAGTAGTGCCTGGTCCTCCCGGCCCAGCGAACTCGCTGTCCATCGGTACAGTCAGTGAGGGAGACGCCGCTGCGAACGTGACCGGGTCAGCGCCCGAGCAGGTCCTGAACCTGGTGCTTCCTCGAGGACCGCAGGGGGAGGTGGGTCCCCCTGGTGAGGTGTCTGAGGCTGAACTCAACGCTGCCATCTCGGCAGTGCTGGATCAGGTCATCGACGGGTCACCGGGAGCGCTCGATACGCTGAACGAGTTGGCTGAAGCCCTGGGCAATGATCCGAACTTCGCCGCGACGGTCACCGCTCAGATTGCTGAGAAGGCTGACAAGCTCAGGCAGATCATCGCTGGCGCAGGTCTCACTGGTGGCGGCACTTTGGAGGCCGACCGTACGCTCGCCGTCGACTTCGGCACGGGCACGAACCAAGCTGTCCGCGGAGATGACGTTCGCCTGTCGAACGCTCGCACTCCGACGAGCCACCAGCACAATGCCTCCGATATCAACGCCGGAACGTTGGACATTGCTCGGCTGCCGTCAACGGTCATGCGTGGGTGGTCGATCGTCTCTCAGTCGACTGCACCAAGCGGGGCACCGTCCACACAGATCACCATCCGAACGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7082a17879ec4d3dad8ff83ec630fa6a00778d00596b0953b0ffb74bb3b27dba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the Genome of the Polyvalent Lytic Bacteriophage GTE2, Which Has Potential for Biocontrol of Gordonia-, Rhodococcus-, and Nocardia-Stabilized Foams in Activated Sludge Plants Petrovski,S., Seviour,R.J. and Tillett,D. 2011 21498753 GenBank