Protein

View in Explore
Genbank accession
WCS66273.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MAAQLEDLSMSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKATDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVNQDADAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:835 AA
molecular weight: 93025,84910 Da
isoelectric point:5,92714
aromaticity:0,10659
hydropathy:-0,33210

Domains

Domains [InterPro]
DC_0058
STR
1–835
DC_0058
IPR058003
TTP
10–826
IPR058003
WCS66273.1
1 835
Architecture
STR
STR 1-835
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCS66273.1
1 835
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,9839
Central domain 149 347 200 0,2319
C-terminal 348 835 487 0,3056
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-347
C-terminal
348-835

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_P1G
[NCBI] 		3025372 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa PA14
[NCBI] 		652611 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCS66273.1 [NCBI]
Genbank nucleotide accession
OQ230793 [NCBI]
CDS location
range 25396 -> 27903
strand +
CDS
GTGGCGGCGCAGCTTGAGGACCTGAGCATGAGTTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGAGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCCGGCCAGCTCAGTGAGCAGATCAACATGGTATCGGACCCCGTGTCGGGGCTGCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTAGGTGGCCGCAGCATTGCGATGCTGGTGGCTCAGCACCGGGGCGAGCTGTACCTGTTTGACGAGCGAGATGGCCGCCTGCTGATGGGGCAGCCCCTGGTGCATGACTACCTCAAGGCTACCGATTACCGGCAGCTACGGGCCGCCACGGTGGCCGACGACCTGTTCATCGCCAACCTAAGCGTGAAGCCCGAGGCTGACCGCACCGACATCAAGGGCGTGGACCCCAACAAGGCCGGCTGGCTGTACATCAAGGCGGGCCAATACTCGAAGGCATTCTCCATGACCATCAAGGTCAAGGATAACGCCACGGGCACCACCTACAGCCACACGGCCACTTACGTGACGCCGGACAACGCCAGCACGAACCCCAACCTCGCGGAAGCACCCTTCCAAACGAGCGTGGGCTACATTGCCTGGCAGCTCTACGGCAAGTTCTTCGGGGCGCCGGAGTACACCCTGCCCAACTCGACGAAGAAGTATCCGAAGGTGAATCAGGACGCCGACGCGGCGACCATCGCCGGCTACCTCAACCAGCGTGGAGTGCAGGACGGGTACATCGCATTCCGTGGTGATGCCGATATCCACGTCGAAGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGCGGTATGAGCCTCAACGCCACGGCAGACCTGCCGGCCCTGTTGCCGGGTGCGGGTACTCCTGGCGTCGGCGTGCAGTTCATGGACGGCGCGGTCATGGCCACCGGCTCGACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCACTGGCCCTGCGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGCTGGAGTATGATCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTTCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAATCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCCGCCCAGGGCAGCCTGACCGAGCCGTACGAGCATGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCTGGCGGTGGTATCGTGACGCCTCGGACGGCAGTAATCAGCATCACCACGCAGTACGACCTCGATACCCGAGCGGCACCTGCCGTGACCGGACGTAGTGTGTACTTCGCTGCCGAGCGTGCCCTGGGCTTCATGGGCCTCCACGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGTTACATGCCGGGACCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTGCAGAACGCGTTTCATCGCTGGACGTTGCGGCATCAGATCATCGGCGCCTACTTCACTGGCGACAACCTGATGGTTCTGATTCAGAAGGGCCAGGAGATCGCCCTGGGACGGATGCACCTGAACAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCTAAATACGACTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAACTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTGTACCAGCTACAGCCTGTGGCCGGCGCCTACATGGAGCGTACCCACCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTGGTCGGGGCGGTGTATGTGGTCGGCTGCGAGTTCTGGTCGAAGGTGGAGTTCACTCCGCCGGTTCTCCGGGACCACAATGGCCTGCCCATGACCTCGACCCGTGCAGTGCTTCATCGGTACAACGTAAACTTCGGCTGGACCGGCGAGTTCCTGTGGCGCATCAGCGACACGGCTCGACCCAACCAGCCGTGGTACGACACAACGCCCCTTCGGTTGTTCAGCCGGCAACTCAATGCCGGGGAGCCTCTGGTGGATAGCGCTGTGGTGCCACTGCCGGCACGGGTCGATATGGCCACGTCCAAGTTCGAGCTGAGCTGTCACAGTCCGTACGACATGAACGTTCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAACCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cb522d9064b4880deac9984758a58472a6cd83daa6d69462a608defb5d1e22d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2917
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of the Pseudomonas phage vB_PaeP_P1G Pires,D.P., Ferreira,M., Costa,M.J., Brandao,A., Azeredo,J. and Santos,S. 2015-10-29 — GenBank