Protein

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Genbank accession
GENB_98ad9ae1090f [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MPVVWHCGFNGIVNNTMNIGQANLFINNNDTASVGHALSNDNLINNIFGRGGLGNQNGGLLPLINYYGRKWVSNGSYGSSYVFGRVKPSFFDNSVPCLSSELSQPANQSDWWGGWQFRIDLCWPSAERLTTSWRMGFRIGRALHPTNQIGYNIYICPAAMNEANAQNLYGIQAIAGQAEKYMEIEWIVDTKTLNIYQDDELVSTRPNYTANDMSYGIILMCEHYVGGNTNSTPFFGFELRDMYIQKIVSDADQRLGSSTKVYAFNPVTDDVVQFSRPDGYSSNAAVAVTPIANGGVNPIPSVTAAILGADVVGLQDLYNIDISKVSSRLASIEAVNVRTMARNPLLGSRQAAAIAKSGATQTQSENTSTLEQGGQWRFNTLQMVSDPADGARWNLTKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:409 AA
molecular weight: 44663,62940 Da
isoelectric point:5,85046
aromaticity:0,10024
hydropathy:-0,19707

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_98ad9ae1090f
1 409
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,0015
Central domain 87 285 200 0,0940
C-terminal 286 409 123 0,9208
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-285
C-terminal
286-409

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage KpYy 1 41
[NCBI] 		2698927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871450.1_CDS_[complement(17043..18272)] [NCBI]
Genbank nucleotide accession
MN871450.1 [NCBI]
CDS location
range 17043 -> 18272
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
d54b0a17a4719eb3ef650f53ba02ef27fc9ddd8cd1a2360081b511d547b47fb1

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,5746
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50