Protein

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Genbank accession

QPI18077.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,89

Protein sequence

MAKPKDPIVVWAAQDVNLPGTGRPNKSKPIDDLLAKGYDKGQKPAAEEFNYILNMSSGWINWIVNEKFPELEAEIARLLAELEARINAQLLIIRQDIATLKQDVADLRRYVDQKVLELKQEIQGVRNDLNKLRQDFDAAIAQVNGRIDDLEPRLVPIGAVIPWPGGTVPNGWLECNGQVFNTGQNPKLYSVLGRNVVPDYRGLFLRGWAHGSNAFDPDAGRALGSVQGDAIRNIQGRFAADHGETWIIGRFNEGPFYDSGVAGNGDTGSKGGETRQIRFDASRVVPTAPENRPKNVAVMYIIKTDQAQSSGGNSPTGIVVSPDTITNRVGYTVKATANVLPASLAGQYPVSWASQNAAVATVDGSGNIRLVGPGETNIIASISTGMNVQIRVTSYSVLTSISIGDPGQIEVDQSKLLVITKNPGSANEPLQYLSNNSGVATVNDAGYVTGVSPGTATITVRGTLSGVSSTRSVTIIAAAVEEIVQDNRLGAQGSYIPPGNEISWTFRAPAGCALTGIIVQDVGSNSADNIGGVYYKPIQKKINGVWVTITG

Physico‐chemical properties

protein length:	551 AA
molecular weight:	58755,44100 Da
isoelectric point:	5,72291
aromaticity:	0,06534
hydropathy:	-0,19383

Domains

Domains [InterPro]

DC_0413
STR
1–530

DC_0413

G3DSA:1.20.58.130
Unmapped
88–154

G3DSA:1.20.58.130 SSF88874 G3DSA:2.60.40.1080 IPR003343

Coil
Unmapped
115–142

Coil IPR051934 IPR003343 G3DSA:2.60.40.1080

IPR037053
ATT
155–206

IPR037053 IPR008964 IPR003343

IPR011083
ATT
158–204

IPR011083 IPR003343 IPR008964

QPI18077.1

1 551

Architecture

STR

ATT

STR

STR 1-154 | ATT 155-206 | STR 207-530 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0413	STR	DC_0413	1	530	Novel HMM	DC_0413	Central	Low	Positional only	85 proteins / 85 hits
G3DSA:1.20.58.130	Unmapped	-	88	154	Gene3D	None	-	-	-	-
Coil	Unmapped	-	115	142	Coils	Coil	-	-	-	-
IPR051934	Unmapped	-	150	242	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
SSF88874	STR	SSF88874	154	303	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	155	206	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	158	204	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	314	395	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	314	393	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR008964	RBD	IPR008964	316	392	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	316	380	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR003343	STR	DC_0008	397	474	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	398	478	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	408	460	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR008964	RBD	IPR008964	415	461	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pectobacterium phage POP15 [NCBI]	2759209	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Pectobacterium carotovorum subsp. carotovorum [NCBI]	555	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Genbank protein accession

QPI18077.1 [NCBI]

Genbank nucleotide accession

MT560059.1 [NCBI]

CDS location

range 25876 -> 27531
strand +

CDS

ATGGCTAAACCAAAGGACCCGATTGTAGTATGGGCGGCGCAGGATGTCAACCTTCCGGGGACAGGCCGACCAAACAAATCTAAACCTATTGACGACTTGCTCGCCAAGGGTTACGATAAGGGTCAGAAACCTGCTGCTGAAGAGTTCAACTACATTCTGAACATGTCTTCCGGCTGGATCAACTGGATTGTGAACGAAAAGTTCCCGGAACTGGAAGCGGAAATCGCCCGTCTTCTGGCTGAACTGGAAGCCCGCATCAACGCCCAGTTGCTCATCATCAGACAAGATATTGCAACCCTGAAGCAGGATGTTGCGGATCTTCGCCGCTACGTGGATCAAAAGGTCTTGGAACTGAAGCAGGAGATCCAAGGCGTCCGTAATGACCTGAACAAGCTCCGCCAAGATTTCGATGCCGCTATTGCCCAAGTTAACGGACGTATCGACGATCTGGAACCTCGCCTCGTGCCAATCGGTGCCGTTATTCCTTGGCCCGGCGGTACAGTTCCTAACGGGTGGTTGGAGTGTAACGGTCAGGTATTCAATACCGGGCAGAACCCGAAACTGTACAGCGTCCTTGGGCGTAACGTTGTTCCGGACTACCGTGGCCTGTTCCTGCGTGGTTGGGCACATGGCTCCAACGCCTTTGACCCAGATGCGGGTCGTGCTCTCGGCTCCGTTCAGGGTGACGCAATTCGAAACATCCAAGGTCGCTTTGCGGCGGACCACGGTGAAACGTGGATCATTGGTCGTTTCAACGAAGGTCCGTTCTATGATTCAGGTGTAGCTGGCAACGGCGATACCGGGTCCAAAGGTGGAGAGACACGTCAGATTCGTTTCGACGCATCACGTGTGGTTCCAACGGCCCCTGAGAACCGTCCAAAGAACGTCGCCGTGATGTATATCATCAAGACCGACCAGGCTCAGTCTTCCGGCGGCAACTCACCGACTGGGATCGTGGTTTCTCCAGACACAATCACCAACCGTGTGGGATATACCGTGAAGGCAACAGCTAACGTGCTGCCAGCCTCGCTCGCAGGTCAGTACCCAGTGTCTTGGGCAAGCCAGAACGCCGCCGTTGCGACGGTTGACGGCTCCGGCAACATCCGCCTCGTAGGACCTGGTGAAACGAACATCATTGCCTCCATCTCTACCGGGATGAACGTGCAAATTCGTGTGACCAGCTACTCTGTCCTGACCAGTATTTCAATCGGAGATCCGGGCCAGATCGAGGTTGACCAGTCCAAGCTCTTGGTTATTACCAAGAACCCAGGTAGCGCCAACGAACCGCTCCAGTACCTGTCCAACAACTCTGGTGTTGCGACGGTGAACGACGCAGGGTACGTAACTGGTGTCTCCCCTGGAACGGCAACCATCACTGTTCGTGGTACTCTGTCTGGTGTATCGAGCACTCGTTCAGTGACCATCATTGCAGCAGCGGTGGAAGAGATTGTCCAAGATAACCGCCTCGGTGCCCAAGGGTCTTACATCCCACCGGGTAACGAGATTAGTTGGACATTCCGTGCGCCAGCGGGGTGCGCCCTGACAGGAATCATCGTTCAGGACGTTGGATCTAACTCTGCCGATAACATTGGTGGCGTTTATTACAAGCCCATCCAGAAGAAAATCAACGGTGTCTGGGTAACTATCACGGGGTAA

Genome Context

Tertiary structure

PDB ID

855ca04ef8350a5ac17cc1fe1df3dcf41405849cd7ad14a5ee1e372c29fd2606

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8173

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence