Protein

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Genbank accession
AAT37770.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPKQGSYPMGVRTLANGDTLTGVVTSDTADVPVETLRAFNETTGNLNPANVSAPDLLDGTETWSIRKAGTWARASLSAIASFCAGVALVWQAAGTGAVLRTLVKKFGDYPVTPQDYGAAGNGTTPDDTAIATFWTAVKLVGKGWIPKATYKCNNPIVWDMTGLGDTGVVVEGGGQKAAIFDLSTVTSAPAFLITKTDGAAFYSEFRNFGIRANVAGAALQLGRTDFSDPQNAFSFENMWVGNNNPSTSAIGVQVNYVLGSQFKNIVPACNHGGDSWQINAASFCKWEGGSGTWAQNGIHLTAGGAGTGTIAGNVFEAMDFEENTAASVTIDTNNAHNNTFIGSTFVYNPNSYTPWATSTVYALNAVVISNRAVYKATTGGTSASSGSGPSGTGASISDGTVVWAYQNAGTSVGVNASAGSENFFISPNTLCYPSGTPSYSNFFSNSAGCGLMGKFGMTVGMEIGSPSFYATLSASQNVTAGTWTKGQYDTVGAQRGIGAYDATTKYRFTAPFAGWYRFKHCAIINATNASNAVAYAALYKNGSNLRAAGVSVAAGVNFVAAQVDAMLYLNGGDYIEAWSSIPASSGTPAINGGASNSWFEGQYIG
Physico‐chemical
properties
protein length:605 AA
molecular weight: 62680,68520 Da
isoelectric point:5,33533
aromaticity:0,11240
hydropathy:-0,03174

Domains

Domains [InterPro]
DC_0790
STR
10–158
DC_0790 DC_0300
IPR008983
RBD
465–604
IPR008983
IPR008983
RBD
466–603
IPR008983
AAT37770.1
1 605
Architecture
STR
STR
STR 10-158 | STR 355-605
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAT37770.1
1 605
Domain Start End Length (AA) Confidence
N-terminal 1 124 124 0,9790
Central domain 125 351 228 0,9927
C-terminal 352 605 253 0,7622
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-124
Central
125-351
C-terminal
352-605

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepB1A
[NCBI] 		279530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAT37770.1 [NCBI]
Genbank nucleotide accession
AY616033.2 [NCBI]
CDS location
range 2492 -> 4309
strand -
CDS
ATGCCGAAGCAAGGTAGTTACCCGATGGGGGTTCGCACGTTGGCAAACGGTGACACGCTCACTGGCGTGGTTACTAGCGATACCGCAGACGTACCCGTCGAAACGCTGCGTGCGTTCAACGAAACGACAGGTAATTTGAACCCTGCCAACGTAAGCGCGCCCGATTTGCTCGACGGGACTGAAACGTGGTCGATTCGTAAAGCCGGCACGTGGGCGCGTGCGTCACTGTCGGCTATCGCATCATTCTGCGCAGGCGTTGCATTGGTATGGCAAGCTGCGGGAACGGGCGCAGTATTGCGCACTCTGGTTAAGAAATTTGGAGATTACCCTGTCACTCCACAAGACTATGGGGCTGCGGGCAATGGTACAACGCCCGACGATACCGCGATCGCTACGTTTTGGACTGCTGTAAAGCTCGTAGGTAAAGGCTGGATACCAAAGGCGACCTATAAATGCAACAATCCTATTGTGTGGGATATGACCGGTCTTGGGGATACTGGCGTCGTTGTGGAAGGCGGGGGCCAAAAGGCAGCAATATTTGACCTATCGACCGTAACAAGCGCGCCAGCGTTTCTTATCACCAAAACTGACGGTGCGGCATTTTATAGTGAATTCCGAAACTTTGGAATTCGGGCGAATGTTGCGGGTGCCGCACTGCAATTGGGGCGAACCGATTTCAGTGATCCGCAAAATGCGTTTTCATTTGAAAACATGTGGGTCGGCAATAACAATCCATCCACATCAGCAATTGGTGTGCAAGTGAATTATGTACTTGGTAGCCAATTTAAAAATATCGTACCCGCGTGTAATCACGGTGGCGATAGCTGGCAAATTAACGCTGCATCATTTTGTAAATGGGAAGGTGGTTCTGGCACCTGGGCACAAAACGGTATTCATTTAACGGCAGGCGGTGCAGGAACCGGCACGATTGCCGGCAACGTATTTGAGGCGATGGACTTCGAAGAGAATACGGCCGCGTCCGTTACCATCGATACGAATAATGCTCACAATAATACTTTTATTGGTAGCACGTTTGTATATAACCCTAATAGTTATACCCCGTGGGCGACGTCTACTGTATATGCCCTGAATGCTGTCGTGATCAGCAACCGCGCAGTTTACAAAGCTACAACAGGTGGCACGTCGGCTTCATCGGGAAGCGGACCTAGTGGAACGGGTGCGTCCATTTCGGACGGTACTGTTGTGTGGGCTTATCAAAACGCAGGAACAAGCGTTGGTGTGAATGCTTCAGCAGGCTCAGAAAACTTTTTCATTTCCCCCAACACTTTGTGTTATCCGTCAGGCACGCCAAGTTATTCAAATTTCTTTAGTAATTCTGCTGGCTGCGGCTTGATGGGTAAATTTGGAATGACTGTAGGAATGGAAATCGGAAGTCCGTCTTTCTATGCCACTCTTTCGGCAAGTCAAAACGTTACTGCCGGCACATGGACCAAAGGGCAATATGATACGGTTGGCGCTCAACGTGGCATTGGTGCTTACGACGCGACTACTAAATATCGATTTACTGCACCATTTGCAGGATGGTATCGATTCAAGCATTGCGCAATTATCAACGCCACTAATGCGTCAAACGCAGTAGCATACGCAGCACTCTATAAAAACGGTTCGAATCTTCGCGCGGCCGGCGTGTCAGTTGCAGCCGGTGTAAATTTTGTTGCTGCTCAGGTTGATGCGATGCTGTACTTGAACGGCGGCGACTATATTGAGGCATGGAGTAGTATTCCGGCAAGTAGCGGAACCCCTGCAATAAATGGTGGTGCGTCAAATAGCTGGTTTGAAGGTCAATACATTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b7b7ff9bfda3b812515ea109930bf26be538486fba22c2842d233a0096dfa26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8371
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50