Protein

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Genbank accession
YP_001039674.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSYTYQSHTTSANVTSYSFSFAGSDPGYIAVSNIAVEVRASGDTEWSTLDTSRWNLTGTNMITLTSAIAAPADGQNNLRIRRIVDKDKPYASFVRGSMLDMLNLDRSLIQLVEMVQEILDGFFPEGFYFQQNINMNGHKFYNLGNGTAAGDSVNFGQLTSVNNALGDRITAVDTKHTNWNNTQDNEIASLQAGIASNGTAAYVPFRYVAVGGETVISPPYVFRTARVDRNGVMQHEVDGAYTISGNKITLAGPLRVGDVVRCEIGTGWNPNSSNLAGSTADRPVNPNVGYMYFDTTLNKTVWYTGTGTTWVDANGVVS
Physico‐chemical
properties
protein length:318 AA
molecular weight: 34499,83790 Da
isoelectric point:5,06699
aromaticity:0,10063
hydropathy:-0,24214

Domains

Domains [InterPro]
DC_0041
STR
1–318
DC_0041
IPR005604
ATT
27–121
IPR005604
YP_001039674.1
1 318
Architecture
STR
ATT
STR
STR 1-26 | ATT 27-121 | STR 122-318
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Era103
[NCBI] 		418443 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Eracentumvirus
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001039674.1 [NCBI]
Genbank nucleotide accession
NC_009014 [NCBI]
CDS location
range 36865 -> 37821
strand +
CDS
ATGAGTTACACCTATCAGTCCCACACTACAAGCGCAAACGTTACATCGTACAGCTTCTCATTCGCTGGTTCAGACCCAGGCTACATTGCTGTGTCTAACATTGCTGTGGAAGTTCGTGCAAGTGGTGATACTGAGTGGTCAACCTTAGATACATCCCGTTGGAATCTGACGGGAACTAACATGATCACTTTGACCTCTGCCATCGCAGCACCAGCAGACGGTCAGAACAACCTGCGTATCAGACGTATCGTAGACAAGGATAAGCCATATGCTTCCTTTGTCCGTGGTTCAATGCTTGATATGTTAAACCTGGACCGAAGCCTTATTCAGTTGGTTGAGATGGTGCAAGAGATTCTTGATGGGTTCTTCCCTGAAGGATTCTACTTTCAGCAAAACATCAACATGAATGGACACAAGTTCTACAACCTCGGCAATGGTACAGCCGCTGGGGATTCTGTTAACTTTGGTCAGCTTACGTCTGTAAACAATGCACTGGGTGATCGTATCACTGCTGTAGATACGAAGCACACCAACTGGAACAACACCCAGGACAATGAGATTGCCAGCCTTCAGGCAGGTATCGCATCGAATGGAACAGCAGCCTATGTACCATTCCGGTATGTAGCAGTTGGGGGCGAGACAGTTATCAGCCCTCCTTATGTCTTCCGTACTGCACGTGTTGACCGTAACGGTGTTATGCAACATGAGGTGGATGGAGCTTACACAATCTCCGGCAACAAGATTACACTGGCAGGCCCATTGCGTGTTGGTGACGTTGTTCGCTGTGAGATTGGTACGGGGTGGAATCCTAATAGTTCCAACCTGGCTGGCTCTACGGCAGACAGACCTGTTAATCCGAACGTAGGTTACATGTACTTTGACACCACACTGAACAAAACTGTTTGGTACACTGGCACAGGTACTACCTGGGTTGACGCTAACGGTGTCGTCTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1a249112e188b39feebd98f2b32fe326f33ff9aea49c4e242d557dc628ae4ca5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8421
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Erwinia amylovora phage Era103, a new member of the T7 superfamily related to SP6, K1-5 and K1E Summer,E.J., Thilaganathan,N., Hall,J., Vidaver,A.K., King,M.D., Robinson,S., Young,R. and Gonzalez,C.F. 2010-01 — GenBank