Protein
View in Explore- Genbank accession
- WAV88272.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MRNPERGQEITIPLLYGDGRRSNTLDWSTRLPENMLAVSRNIKGGNGYMRIMPGITKRGDDVAGVSRGADWNTVKGQTYRVMGQSLYLDGEVVDSITGVDRTPMAHSRNRVAIVTENRMIMIGYDGSRTAFSNWPTSDDDPIAQYNWGDINDVCHLRQRFIFSTKGTDTFWISDLDDETHPDKTAPAYRAESMPDGIVAIRSWRDYVVCFGSASIEFFGLTGDDQNVYANQPSYTIDAGTIGRESVCEYLESFAFLVSPFSGDLTIGLMNPGGGSWSELASVEVKKILMGYTVEELADVRLESLTFETHKLLIVHLPDYTLVYDHPVSQAQGVPVWSYIKTGINGIKPHRAIDYVNEGKVITVGDKVEPWLGQLDHTTSAQYGEDQEIVLYTPLLWAENAILADFRMDASTGGDSVASRIWLSATEDGIVYGQEKSIDYNKPFHWLQNIILRVVGRVRSAIGFKIRTVGATPATLSRARVRVT
- Physico‐chemical
properties -
protein length: 483 AA molecular weight: 53762,90180 Da isoelectric point: 5,18635 aromaticity: 0,09524 hydropathy: -0,27039
Domains
Domains [InterPro]
IPR021098
STR
11–482
STR
11–482
1
483
Architecture
STR 11-482 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
483
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 345 | 345 | 0,8483 |
| Central domain | 346 | 472 | 128 | 0,2200 |
| C-terminal | 473 | 483 | 10 | 0,9814 |
Note: Constraints were applied during segmentation.
Fixed 63 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 63 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-345
1-345
Central
346-472
346-472
C-terminal
473-483
473-483
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Phage ST231 [NCBI] |
3003727 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Enterobacteriaceae bacterium [NCBI] |
1849603 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WAV88272.1
[NCBI]
Genbank nucleotide accession
OP921041
[NCBI]
CDS location
range 14182 -> 15633
strand +
strand +
CDS
ATGAGGAACCCAGAACGCGGGCAGGAGATCACGATCCCCTTGCTCTATGGCGACGGACGTCGCTCAAACACGCTCGACTGGTCAACGCGCCTACCGGAGAACATGCTCGCGGTATCGCGCAACATCAAGGGCGGTAACGGCTATATGCGCATTATGCCGGGCATCACGAAGCGCGGGGACGACGTGGCGGGCGTAAGCCGTGGCGCTGACTGGAACACGGTCAAAGGCCAGACTTACCGCGTCATGGGCCAGTCCCTCTACCTGGACGGCGAAGTGGTGGACTCCATCACTGGCGTGGACCGTACCCCGATGGCGCATAGCCGGAACCGCGTCGCGATCGTGACCGAGAACCGCATGATCATGATCGGCTACGACGGGAGCCGGACGGCGTTCTCCAACTGGCCCACGTCGGACGACGACCCGATCGCCCAATACAACTGGGGCGACATTAACGACGTTTGCCACCTCCGCCAGCGCTTCATCTTCTCCACGAAGGGAACGGACACTTTCTGGATCTCCGACCTGGACGACGAGACGCACCCGGACAAGACGGCCCCGGCCTATCGTGCCGAGTCCATGCCGGACGGCATCGTGGCGATCCGCTCGTGGCGTGATTATGTCGTTTGCTTCGGTAGCGCCTCGATCGAGTTCTTCGGCCTGACCGGGGACGATCAGAACGTCTACGCGAACCAGCCCTCCTACACGATCGACGCCGGGACGATCGGGCGTGAAAGCGTCTGCGAATATCTGGAGTCGTTCGCGTTCCTCGTGTCCCCATTCTCCGGCGATCTGACGATCGGCCTGATGAATCCGGGCGGCGGCTCGTGGTCTGAACTGGCAAGCGTGGAAGTTAAAAAGATCCTCATGGGTTACACCGTGGAGGAACTGGCGGACGTCCGACTGGAGTCACTGACCTTTGAAACGCATAAATTGCTTATTGTCCACCTCCCGGACTATACGCTGGTATACGATCACCCCGTTAGCCAGGCCCAGGGCGTCCCGGTCTGGTCATATATCAAGACGGGCATTAACGGCATCAAGCCGCACCGGGCGATCGACTACGTGAACGAGGGCAAGGTGATCACCGTCGGCGACAAGGTGGAGCCGTGGCTGGGCCAGCTTGATCACACGACCAGCGCCCAATATGGCGAGGACCAGGAGATCGTCCTGTATACGCCGCTACTGTGGGCCGAGAATGCGATCCTTGCCGACTTCCGCATGGATGCCAGCACCGGGGGCGACTCCGTAGCGAGCCGGATCTGGCTCTCCGCGACCGAGGACGGGATCGTGTACGGGCAGGAGAAAAGCATCGACTATAACAAGCCGTTCCACTGGCTCCAGAACATCATCTTACGCGTGGTGGGCCGAGTCCGTTCGGCTATTGGCTTTAAAATCCGCACCGTTGGCGCAACCCCGGCGACTCTCTCGCGGGCGCGTGTTCGTGTGACCTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
29305bf7be31afdf2b5ce5aeb186075c067ba0f814097cb8203b6ae20f80b09d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50