Protein

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Genbank accession
WJN64920.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEVQGSYGRQLQGVSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILDSLDPNSLIHHYKRGDDAEEYFVILRPGQVPVIFTVNGLPCSVNTQGSAATYLNSSSLPRETTQLMTIGDYTFVLNRTMPVRARGDMTPGLDNKGLVYVAYANFSFTYQILINGNVAAQHKTASSEDVKNEDLVRTDYVAGKLIEDWETKKQNFPGFSMYQDGNVIVVDNNSGAAYSLTTIDGADGQDLVAIRHKVSNLDTLPNRAPAGYKVQVWPTGSKPESRYWLQAEPQDGSKVTWVETIAPGVRLGWDGATMPHVLVRESLNSDGSANFTYRPGEWEDRDVGDDLTNDFPSLLNVASPQPISSMLMVQNRLMLTSGEAVVASRTSRFFDFFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVILFTSDQQFTLPGDKPLTPTSAVIRPVTAFKMTPGVRPVPSGDSILFAFDQGSYSGIREFFTDSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITNNDRSVLYVYDWLYEGTEKVQNAWHKWSFPAGTVLHTVSYSNEKLYLVMSRNNTSGAVAGVYIEVMDMGDELEYGLQDRVRMDRRATSNMHYNAANRTWTSDPLKWLPTDLSSLDAVLLTGWPSYVGGAFQFSYNPSTNTISTNFDLAEGGTVQVVVGETYWYEVEPTPPLIKDSKDRVSYLDTPTVGNIYLNLDMYPDFSVVVTDKETLQERVVYLSNKVAGSLTNVIGYISPHEGTLRVPIRRKSTDISFKVRSKSPSTFQLRDIEWTGSYNPRKRRV
Physico‐chemical
properties
protein length:806 AA
molecular weight: 89869,76640 Da
isoelectric point:5,37074
aromaticity:0,10298
hydropathy:-0,34020

Domains

Domains [InterPro]
IPR058003
TTP
3–806
IPR058003
WJN64920.1
1 806
Architecture
TTP
TTP 3-806
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJN64920.1
1 806
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9951
Central domain 144 360 218 0,1086
C-terminal 361 806 445 0,1421
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-360
C-terminal
361-806

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Tapenade
[NCBI] 		3056603 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJN64920.1 [NCBI]
Genbank nucleotide accession
OQ818708 [NCBI]
CDS location
range 28723 -> 31143
strand -
CDS
ATGGAAGTACAAGGCTCATACGGGCGTCAGCTACAGGGTGTATCACAACAACCCATCGCGGTCAGGTTGCCAGGGCAGGTCACGTCACAACTTAATGCAGTGCCGAATGTGGTTGATGGCCTTAAAACTCGTATGGGTTCTAAGCACCTGGCCCGTATCCTCGACAGCCTCGACCCAAACTCCCTTATTCATCATTACAAGCGCGGTGACGATGCGGAAGAATATTTTGTCATCCTCAGACCTGGACAGGTTCCCGTTATCTTCACGGTTAACGGCCTACCTTGTAGCGTCAATACCCAAGGATCGGCAGCTACCTATCTGAACTCGTCAAGTCTCCCGCGTGAGACAACCCAGTTAATGACCATTGGTGACTATACCTTTGTGCTTAACCGGACAATGCCAGTGCGTGCGCGTGGTGATATGACACCTGGTCTGGATAACAAAGGCCTGGTATATGTTGCCTACGCAAACTTCAGCTTCACCTACCAAATCCTCATCAATGGGAATGTGGCAGCACAGCATAAGACAGCCTCTTCTGAGGATGTTAAAAATGAAGACCTGGTAAGGACGGATTATGTTGCTGGTAAGCTGATTGAAGATTGGGAAACTAAGAAGCAAAACTTCCCTGGGTTCTCCATGTATCAGGACGGTAACGTTATTGTAGTTGATAACAATAGCGGTGCTGCATATTCACTCACTACCATCGATGGTGCAGACGGGCAGGACTTAGTAGCAATCCGCCACAAGGTATCTAACCTGGACACCTTACCGAACCGCGCACCTGCTGGGTACAAAGTTCAGGTATGGCCTACCGGGAGTAAACCAGAGTCACGCTATTGGTTGCAAGCTGAACCACAGGACGGCTCTAAGGTAACGTGGGTTGAGACTATCGCACCGGGTGTACGCCTGGGCTGGGATGGGGCTACAATGCCTCATGTCCTTGTGCGTGAAAGCCTTAACTCAGATGGCTCTGCTAACTTCACATACAGACCTGGTGAGTGGGAAGACCGGGACGTAGGCGATGACCTGACTAACGATTTCCCGTCCCTGCTTAATGTGGCCTCACCCCAGCCTATTTCTTCCATGCTGATGGTACAGAACCGCTTGATGCTTACATCGGGGGAGGCAGTGGTGGCAAGCCGTACCTCTCGCTTCTTTGACTTCTTCCGATACACTGTACTGGCTACGGTAGATACGGACCCATTTGATGTGTTCGCAGATATCGAGGAAGTGTATAACATCCGGTGGTCAGCACAGATGGATGGTGACGTTATCCTGTTCACATCGGACCAACAGTTCACGCTGCCTGGTGACAAGCCACTTACCCCAACATCCGCAGTAATCCGTCCGGTCACAGCATTCAAAATGACACCAGGCGTAAGGCCTGTACCTTCCGGTGACTCCATCCTGTTTGCATTCGACCAGGGTTCTTACAGTGGCATCCGTGAGTTCTTCACAGACAGCTACTCAGACACTAAGAAGGCGCAGCCAGCAACTAGCCATGTTGATAAATACATCCGTGGCAAGGTGTTAGAGTTGTCTGCTAGCTCTAGCTTTAACAGAGCATTCATCATTACTAACAACGACCGCAGTGTCCTGTATGTATATGACTGGCTCTATGAGGGCACGGAGAAAGTGCAGAATGCCTGGCACAAGTGGTCCTTCCCAGCGGGTACGGTATTGCACACGGTGAGCTATTCAAATGAGAAACTCTACCTTGTAATGTCCCGTAACAACACTAGCGGTGCGGTTGCTGGTGTTTACATTGAGGTGATGGACATGGGCGATGAGTTGGAGTACGGATTGCAGGACCGTGTTCGCATGGACCGCAGGGCAACATCCAACATGCACTATAATGCAGCTAACCGCACGTGGACCTCTGACCCGCTCAAGTGGCTACCTACGGACCTTAGTTCACTTGATGCAGTCTTGCTCACAGGCTGGCCCAGCTATGTTGGTGGTGCTTTCCAGTTCTCCTACAACCCGTCTACTAATACCATCTCTACCAATTTCGATTTGGCTGAAGGTGGCACAGTGCAGGTTGTTGTGGGTGAAACTTACTGGTATGAGGTTGAACCTACACCACCACTGATTAAGGATAGCAAGGACCGTGTATCTTATCTTGATACGCCAACGGTAGGTAACATCTACCTTAACCTGGACATGTACCCAGACTTCTCAGTTGTAGTGACTGACAAGGAGACATTGCAGGAGCGGGTGGTTTACTTGTCGAATAAGGTTGCTGGTTCTTTAACAAACGTCATCGGTTATATCTCACCTCATGAGGGTACGCTACGTGTTCCTATCCGTCGTAAGAGTACCGATATTAGTTTCAAGGTTCGGTCCAAGTCTCCTTCTACTTTCCAGTTGAGGGATATTGAATGGACAGGTTCCTACAACCCACGTAAAAGGAGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
efc5e9b9982d63aed101cc4c357129465217074b4aec0aa11bf0a41eb14fe133
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3095
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50