Protein

View in Explore
Genbank accession
XBS49665.1 [GenBank]
Protein name
chromosome condensation regulator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFVRMFDYGNEAPALPKIKKLSTGYQHTMLLTQNGDLYAKGSNAAGQLGTGNTTAAREWILVNSSVADVYCSANGTLIKKNDESWWSSGSGAAAGVNSVVNTWTNVSAQINSMLTSLPGSFIKQFVSSFYSSMAIRSDDTVWVIGQNNNGEITGTTAKYNTCVNITSSFPSTPVKIYGSENCMAYTDSTGAFYYSGQMVGGNAGGSANATTFTRYNVGLSTNKIIDFNTTGYGSFFIIETTAGVKQVYAGGYQRYGQLGDGGTTTTILAPAQITTPNSNLIKLFKGTSMYNQHLITKSGIYATGQNSQSQYNGTLGIGSNIDATTYTLAQISLSSYDDIEIHTTLDRTFLWAGDYVYSTGLNSTYSSITSNSYVLDMPSI
Physico‐chemical
properties
protein length:382 AA
molecular weight: 40870,90170 Da
isoelectric point:5,90417
aromaticity:0,11257
hydropathy:-0,16806

Domains

Domains [InterPro]
DC_0433
ATT
1–122
DC_0433 DC_1778
IPR009091
STR
8–367
IPR009091
IPR009091
STR
15–333
IPR009091
IPR051553
Unmapped
19–197
IPR051553
PF13540
STR
20–49
PF13540 DC_0436
IPR000408
STR
23–33
IPR000408
XBS49665.1
1 382
Architecture
ATT
STR
ATT 1-122 | STR 123-381 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XBS49665.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,2279
Central domain 69 286 219 0,3644
C-terminal 287 382 95 0,4678
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-286
C-terminal
287-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage fEgEco12
[NCBI] 		3158837 Uroviricota > Caudoviricetes >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBS49665.1 [NCBI]
Genbank nucleotide accession
PP777464 [NCBI]
CDS location
range 333434 -> 334582
strand -
CDS
ATGTTACCTTTTGTTAGAATGTTTGATTATGGAAATGAAGCACCAGCATTACCAAAAATAAAGAAATTGTCAACTGGATACCAACATACTATGCTTTTAACGCAGAATGGCGATTTATATGCTAAGGGTAGTAATGCAGCAGGACAGCTAGGTACTGGTAATACAACAGCAGCGAGGGAATGGATATTAGTTAATAGTTCAGTTGCTGATGTTTATTGCTCTGCTAACGGTACATTGATTAAAAAGAATGATGAATCATGGTGGAGTTCTGGTTCCGGTGCAGCAGCAGGTGTCAATTCAGTTGTGAATACATGGACCAATGTGAGTGCACAAATCAATAGTATGCTTACTTCTCTCCCTGGTTCCTTTATTAAACAATTTGTATCCTCGTTTTATAGCTCAATGGCTATACGTTCAGATGACACAGTTTGGGTCATTGGTCAAAACAACAATGGTGAAATTACTGGAACTACTGCAAAATATAATACATGTGTGAATATAACCTCTAGTTTCCCCAGTACACCAGTGAAAATATATGGTAGTGAAAACTGTATGGCTTATACTGACAGTACTGGTGCATTTTATTATAGTGGTCAAATGGTCGGTGGGAATGCTGGTGGTTCAGCAAATGCAACAACATTTACTAGATATAATGTTGGTTTGAGTACAAATAAAATAATAGACTTTAATACTACTGGCTATGGTTCATTCTTTATTATAGAAACTACTGCTGGAGTTAAACAGGTATACGCTGGTGGTTACCAACGATATGGTCAATTGGGTGATGGTGGCACTACAACAACAATACTTGCTCCTGCACAAATAACAACACCCAACTCTAATTTAATTAAATTGTTTAAAGGTACGTCAATGTACAATCAGCATTTAATAACCAAATCTGGTATATATGCAACTGGTCAAAACTCCCAATCACAATACAATGGTACTTTGGGTATTGGTTCAAACATTGATGCTACTACATATACACTGGCACAAATATCATTATCATCATATGATGATATTGAAATACATACAACATTGGATAGAACATTCTTATGGGCAGGTGATTATGTTTATAGTACAGGTTTAAATTCTACATATTCATCAATCACTAGCAACTCATATGTGTTGGATATGCCATCAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c78fad7f4012b99a3c5279733306077559f42bb0db32835a7df0a38d47dccce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8490
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50