Protein

View in Explore
Genbank accession
WNO48988.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MPLKTMVLRDEKGSPLTNAEMDGNLRSVLEFMNGIVLPQTAHNLDDYDTPGVYGQNATAGAAAGSNYPVPVAGVLTVKSGGGAGNIVAQQTYRSYFQSSQVSEWYRNKGTAGWSPWYQRARMDQVMSKTVISASAVVDANTLTTDNMWWVWTSGAVMQNGSNFPPGALNSSGIMETQVITASYMVQTCTLTPSSTRRPIEFRRIGNGSTTWSSWRVISPIQIASDLPTADCGDVYVDGDGWYTWGTSAYIRASAAKVLPTAAHNLNTYNVPGVYWQNQSSGATLANNYPAANITCFLEVQNFGNATLQEISARTSPFRKWWRIQTGDSTNWSDWKEYADMASAMTHKFLTSATDANTLTEDNVFYTRVASAALGDNFPQFSTNWPAAGYMRVYRSAPTQVAQELTFLITGQRARTFTRFGNSVNGTWQPWKSTNAWHAATGLPTSDMGDIYVDGVGYHRWSPTDGAYTRWSPDIPNDLYLLKNTARIYGNFESSNGPLGSVAIKSNNTASPHTVLSIVPRVEGGASSVTLWTGDASAVAGLNINSSLTAHNFTSVALNGASHRPIVWYQVNERCGALNTAATWEFGPAASYPVLCRIGINFDGGSTRYGVAMRPNANDTRFFHFCNAAGGDVGSITQSASAVFYNTTSDYRVKKEIEDLDVEVGLNSVLMARPRKFRMKEDNSLHNGFIAHELQEVIPEAVTGVKDDVWPVEAGNGPRMRLQGVDMSKLVPHLVAAVQALNKKLDAAFERIAELERRQ
Physico‐chemical
properties
protein length:758 AA
molecular weight: 82767,42240 Da
isoelectric point:6,47950
aromaticity:0,10290
hydropathy:-0,30264

Domains

Domains [InterPro]
DC_1584
STR
27–194
DC_1584 DC_1584 DC_1584 IPR030392 Coil
cd19958
STR
40–118
cd19958 cd19958 cd19958 cd19958 DC_0203
WNO48988.1
1 758
Architecture
STR
RBD
STR 27-647 | RBD 648-758
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO48988.1
1 758
Domain Start End Length (AA) Confidence
N-terminal 1 328 328 0,2097
Central domain 329 527 200 0,0847
C-terminal 528 758 230 0,9775
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-328
Central
329-527
C-terminal
528-758

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage emuu_LB7
[NCBI] 		3043586 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter sp.
[NCBI] 		134375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO48988.1 [NCBI]
Genbank nucleotide accession
OQ817834.1 [NCBI]
CDS location
range 13505 -> 15781
strand +
CDS
ATGCCTTTGAAGACTATGGTCCTTCGCGATGAGAAGGGTTCTCCTCTCACGAACGCGGAGATGGACGGCAACTTGCGCTCCGTTTTGGAGTTCATGAACGGCATCGTTTTGCCGCAAACGGCCCATAACCTGGATGACTATGATACTCCTGGGGTGTACGGACAGAACGCCACTGCAGGAGCGGCGGCCGGTAGCAATTACCCAGTCCCGGTTGCCGGGGTACTAACGGTTAAAAGTGGCGGCGGGGCAGGCAATATCGTTGCCCAACAAACTTACCGCTCATACTTCCAGAGCTCTCAAGTGAGCGAATGGTACCGTAATAAAGGGACCGCAGGATGGTCCCCCTGGTATCAACGTGCCCGTATGGACCAAGTCATGTCCAAAACGGTCATTTCTGCTTCCGCGGTGGTAGACGCGAACACCCTTACTACGGATAACATGTGGTGGGTGTGGACTAGCGGCGCTGTGATGCAGAATGGCAGTAATTTTCCGCCCGGGGCTCTTAACAGCTCTGGCATTATGGAAACGCAAGTTATTACGGCCTCGTATATGGTCCAAACTTGCACTTTGACTCCATCGTCTACCCGTCGCCCTATTGAATTCCGCCGTATTGGCAATGGCTCGACTACGTGGTCAAGCTGGCGAGTCATTTCCCCGATACAAATCGCGAGCGACCTGCCAACTGCGGACTGCGGTGATGTGTACGTGGACGGCGATGGATGGTATACCTGGGGTACGTCTGCATATATACGAGCCAGCGCCGCCAAAGTATTGCCAACGGCTGCGCATAACTTGAATACGTATAACGTACCAGGGGTGTACTGGCAAAACCAGTCGTCAGGCGCTACTTTGGCAAATAACTACCCTGCCGCCAACATTACGTGCTTTCTTGAAGTGCAGAACTTTGGTAATGCTACTTTGCAGGAAATCAGCGCGCGAACTTCTCCGTTCCGCAAATGGTGGCGCATCCAAACGGGCGATTCGACTAACTGGTCGGACTGGAAAGAATACGCAGACATGGCTTCTGCCATGACTCATAAATTCTTGACGTCTGCCACGGATGCTAATACGCTGACGGAAGACAACGTCTTTTACACGCGGGTCGCATCGGCTGCTCTGGGAGACAACTTTCCTCAATTTTCCACGAACTGGCCGGCCGCCGGGTATATGCGCGTATACCGCTCCGCCCCGACGCAGGTGGCTCAAGAGCTTACTTTCCTCATAACTGGACAGCGCGCTCGTACCTTCACACGCTTTGGCAATAGCGTTAATGGCACTTGGCAGCCTTGGAAGTCGACTAACGCGTGGCATGCTGCAACGGGTCTGCCTACGTCTGACATGGGTGACATTTATGTTGATGGCGTGGGTTATCATCGCTGGTCCCCGACTGATGGCGCGTACACCCGTTGGAGCCCAGATATACCCAATGATTTGTACTTGCTCAAGAACACTGCTCGAATCTACGGGAACTTCGAAAGCAGTAATGGCCCCTTGGGTAGTGTAGCAATCAAGTCGAACAATACTGCAAGCCCACACACCGTGTTGAGCATTGTTCCGCGCGTAGAAGGCGGAGCGTCGTCTGTTACGCTGTGGACTGGAGACGCTTCGGCTGTGGCAGGGCTCAATATAAATTCCTCGTTGACGGCCCACAATTTCACGTCGGTAGCTCTTAACGGTGCTTCCCACCGTCCGATTGTATGGTACCAAGTGAACGAGCGCTGCGGGGCCCTGAATACTGCTGCAACTTGGGAGTTTGGCCCAGCGGCCTCGTACCCGGTACTGTGTCGAATTGGCATCAACTTCGATGGGGGCTCGACTCGCTACGGCGTGGCTATGCGCCCCAATGCCAACGACACGCGTTTCTTCCATTTCTGCAATGCTGCAGGCGGAGATGTTGGTTCCATTACGCAAAGTGCGTCCGCTGTCTTCTATAACACCACGTCTGACTACCGGGTCAAAAAAGAAATAGAAGACCTCGACGTGGAGGTCGGGCTCAACTCGGTACTTATGGCCCGTCCGCGCAAGTTCCGTATGAAGGAAGATAACAGCCTGCACAACGGATTTATTGCCCACGAGCTTCAAGAAGTTATTCCGGAAGCAGTGACTGGCGTTAAGGACGACGTGTGGCCAGTAGAAGCGGGCAACGGCCCGCGTATGAGGCTGCAGGGTGTTGACATGAGTAAGCTTGTACCGCACTTGGTCGCGGCTGTGCAGGCTTTGAACAAAAAACTGGATGCGGCTTTTGAGCGCATCGCTGAATTGGAGCGTAGACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b517a6e79a96d6092dca898c2d061ae5b82b83241a1e93e352b368baf4d45d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7363
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Compounding Achromophages for therapeutic applications Cobian-Guemes,A.G., Le,T., Rojas,M.I., Villela,H., McNair,K., Hung,S.-H., Han,L., Boling,L., Octavio,J.C., Dominguez,L., Cantu,V.A., Archdeacon,S., Vega,A.A., Jacobson,N., An,M., Hajama,H., Burkeen,G., Edwards,R.A., Conrad,D., Rohwer,F. and Segall,A.M. 2006 — GenBank