Protein

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UniProt accession
A0A1D8KMJ9 [UniProt]
Protein name
LamG-like jellyroll fold domain-containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSPIFVGNRKIYGPESSDPAGLIANDEGSVVYNTTDDKLKAWDGSAWNALGGSSGSTEPTTLNTKDIFGDGSGVALYQFDGNSQSTSSASFNGSDGSGISYPTNSKYGTNCIDFDNSTNGHTTPNNAPVSSYPFTISLWAQHDGGWSAASGDNQVIVNTDIGGQRVTLGLVNNTGWPAGIHVMYGGTSHFTSHMDNMIAGGTNYWHHIVWSISGSANIQHKLWIDGHRVNLFNNGGGHGGSAGWNYGANQGNTEEFDGRIDQLRIINREVDDVDVLKLYNEGANPLTIRSDNTLKIHYDFSDANCYAGSGTVINNLAPNGSVFTGTVNGASFNSSTADRYYFDFGGQSNSKHYISTTTDPSTAMTNKAVTMECWVNIDQITSGENDGILSFVSCQNDPAPNSGASISVDNRGTGTHGGTQGGFHYQIGLDNPTASWTTTGSHGNTIIVAPLNQWMHVCATYDGRYKKVYLNGKFISYEGDFELDRDEKIRYNSTTWSVGRQGSQDSRYFDGQIAIVRVYDSALSAAEVANNFIAEKDRFGFTALGARDGSQANPFTSIYDADEKNVDPGSYYFSFGGTTQQLYVDNICGARHILVASSNAASTTIPGGTARNDLAYTLNRNGTSGDLGTPSPDSDYIIGGILDSMSWTTASCKAWGRGVLNGGAQTWANKDLGTWIETQAAISATTGSMARRKVWIQSGVGLTATGDTAVLDGVKKDSSLNANANQSTVGYSINNSGDNSGGTYLGHGTSEGSYEGWYSSAGSADNCQGYTTWIR
Physico‐chemical
properties
protein length:775 AA
molecular weight: 82461,35870 Da
isoelectric point:4,87237
aromaticity:0,10194
hydropathy:-0,46787

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
71–288
G3DSA:2.60.120.200 G3DSA:2.60.120.200
IPR013320
STR
110–283
IPR013320 IPR013320
PF13385
LEC
117–271
PF13385 IPR013320
PF13385
LEC
352–529
PF13385
A0A1D8KMJ9
1 775
Architecture
STR
STR
STR 71-288 | STR 302-537 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1D8KMJ9
1 775
Domain Start End Length (AA) Confidence
N-terminal 1 329 329 0,0279
Central domain 330 528 200 0,3667
C-terminal 529 775 246 0,8151
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-329
Central
330-528
C-terminal
529-775

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM4
[NCBI] 		1883367 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus cam4
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
22b3720bb673ccffed2ca17206ed7161bddeb9d8e99e88de1a1755c4028b5ea3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3068
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50