Protein

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Genbank accession
QVW55684.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MENWLAAHAVRNAWQRPSNDGVLNIAPNRITPNSGAIGFIRDGRASMPLPGEGWWHVYTVDKLHLNFGNIKLPPDRWKKLSACVNAFSAFMLLYNDRGTTFPLDKARVIKRASGQILLALPQSERYNWLDTETLYWRIYAGYDGGDYAGLPLPTTVEFWDTPNGTQIQRACDRYRQLQAAKKGHVTFWLNGVMVESPVPSDIATWDDVEIHVDGRVRRVVDFRCGDLSTFQSTLDGKRKYLLHLPKGSENWTFNNDVEIHVLRARDGRYYWKHRHLSVRQVTFNDLSIPTERISQLRNSFKNLNDIDDLIIRVVIRDDYLRTPVLYNARHIHDLYRLDDSLIISAMTGVNSTMPEWLAKNLEQAGYNKVAAAQFQNITRDLCTDAYGYNATSRYSADTPQRLTLDNGIWRCTLPDLLAVRSVVYEYDGNGMLLGWSRHAGTTDYHSKNPAARIVEAIAGDVDDAVHIVDNAPDFDIPEGINVTLWIRKLVSGTPTNEYTLAVEGTDYTRVDANIAWTVDRTRRWPTVIYDDVHLLFEQTVNVKQGQIRVPILGRSESEPIRTLWTPMETVEVWLNKHPLVFGIDYVVVWPEIVIVAKTWMSDGDTNDVTVRARGVTGVTRSPKTGFVSSGLLSNNSRFDVRDDKVIRVVAGGGLLLREDVVFREDNSVGTDIVPDGFPFSVDDPTIPLRTLVSQDTYVMRDVSRDLDARTEEYLTTFFPTPPPVNPVPLKGWYHLFSPLLNKLLWDYKNKNLILVEDDPEYRISTTQLDRVMVGYISLLQFDPAYIGYDKAFVRVHPHSLYQVVEVDELGFAFLDRVNARYLNGDVQLNQYLKIKG
Physico‐chemical
properties
protein length:836 AA
molecular weight: 95331,78220 Da
isoelectric point:5,92390
aromaticity:0,10526
hydropathy:-0,30921

Domains

Domains [InterPro]
IPR055617
STR
2–835
IPR055617
QVW55684.1
1 836
Architecture
STR
STR 2-835 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW55684.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,9656
Central domain 215 489 276 0,1215
C-terminal 490 836 346 0,0080
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-489
C-terminal
490-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_9
[NCBI] 		2835897 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW55684.1 [NCBI]
Genbank nucleotide accession
MW812341 [NCBI]
CDS location
range 84276 -> 86786
strand -
CDS
ATGGAGAACTGGCTGGCCGCTCATGCGGTGCGAAACGCATGGCAGCGTCCAAGTAACGATGGGGTGCTTAACATCGCCCCTAATCGCATCACTCCGAATTCAGGGGCTATCGGTTTTATCCGTGATGGACGAGCGTCCATGCCACTCCCAGGTGAAGGTTGGTGGCACGTTTACACGGTAGACAAACTGCACCTCAATTTCGGTAACATCAAACTTCCGCCTGACCGCTGGAAGAAACTCAGTGCCTGCGTCAATGCGTTCAGCGCTTTTATGTTGCTGTACAATGACCGGGGCACCACGTTCCCACTGGATAAGGCACGGGTGATTAAACGTGCATCCGGACAGATTCTGTTAGCCCTGCCGCAAAGCGAGCGCTACAACTGGCTGGACACCGAAACGCTGTACTGGAGAATTTATGCCGGATATGACGGTGGGGATTATGCAGGTCTCCCGCTACCGACCACGGTTGAGTTCTGGGACACTCCGAACGGTACACAGATTCAACGAGCGTGTGACCGCTATCGCCAACTCCAGGCGGCTAAGAAAGGGCATGTTACTTTCTGGCTGAACGGGGTAATGGTTGAGTCTCCTGTTCCAAGTGACATTGCCACTTGGGATGACGTAGAGATTCATGTCGACGGTCGTGTAAGGCGTGTGGTGGATTTCCGTTGTGGGGATTTGTCTACATTCCAATCAACACTGGACGGGAAGCGTAAATATCTGCTGCACTTGCCGAAAGGGTCTGAGAACTGGACGTTCAATAACGATGTGGAAATCCATGTTCTGCGTGCGCGCGATGGGCGCTACTACTGGAAGCATCGTCATCTGTCAGTTCGACAGGTAACGTTTAACGACCTGAGTATCCCAACCGAACGTATCAGCCAGCTGCGCAACAGCTTTAAGAATCTGAACGACATCGACGACTTGATTATTCGTGTCGTGATTCGTGACGATTATCTGCGCACGCCTGTTCTGTATAATGCTCGCCACATTCATGACCTTTATCGTCTTGATGACTCGCTGATTATTTCTGCAATGACTGGGGTTAACTCCACAATGCCGGAATGGTTGGCGAAGAACCTCGAGCAGGCGGGCTACAACAAAGTGGCAGCTGCGCAGTTCCAGAATATCACCCGTGACCTGTGTACCGATGCGTATGGCTATAACGCAACGTCTCGTTACTCAGCTGACACGCCGCAGCGTCTGACATTAGACAATGGCATCTGGCGTTGCACGTTACCTGACCTATTGGCCGTTCGTTCTGTTGTGTATGAGTACGACGGTAACGGTATGTTGTTAGGCTGGAGCCGTCATGCGGGTACAACGGACTACCATTCGAAGAATCCTGCTGCTCGAATTGTGGAAGCAATTGCGGGTGATGTGGATGATGCGGTTCACATTGTGGACAACGCACCGGACTTCGATATCCCGGAAGGTATTAACGTCACGTTGTGGATACGTAAGCTTGTCAGTGGTACTCCGACGAACGAGTATACGCTGGCGGTCGAAGGTACCGACTACACTCGTGTGGATGCGAACATCGCTTGGACGGTTGACCGTACGCGACGTTGGCCAACGGTGATTTACGATGACGTGCACCTGTTGTTCGAACAGACCGTTAACGTAAAGCAAGGGCAGATTCGTGTACCGATTCTGGGTCGTAGTGAGTCCGAACCGATTCGTACGTTGTGGACACCGATGGAAACCGTTGAGGTGTGGTTAAACAAACACCCTCTGGTCTTCGGTATCGATTACGTCGTGGTATGGCCAGAGATTGTGATTGTGGCCAAGACCTGGATGTCGGATGGTGACACGAATGATGTGACCGTACGTGCTCGTGGGGTAACAGGCGTTACACGTTCACCGAAGACTGGTTTCGTATCCAGCGGTCTGTTGTCAAACAACAGCCGTTTCGATGTACGTGACGATAAAGTGATTCGTGTGGTTGCAGGGGGTGGCTTACTACTGCGCGAAGACGTGGTGTTCCGTGAGGATAACTCTGTAGGGACAGACATCGTGCCGGACGGTTTCCCGTTCTCGGTTGATGACCCCACTATTCCGCTACGCACGTTGGTTAGTCAGGACACCTACGTCATGCGTGATGTTTCGCGTGACTTGGATGCCCGTACCGAAGAATATCTGACGACGTTCTTCCCGACGCCACCGCCGGTTAACCCGGTACCGCTGAAAGGTTGGTACCACTTGTTCAGTCCACTGCTGAATAAACTGCTGTGGGACTACAAGAATAAAAATCTGATACTGGTGGAAGACGATCCGGAATATCGTATCTCAACTACCCAGCTGGACAGAGTCATGGTGGGCTACATTAGCCTTCTGCAATTCGACCCGGCTTACATTGGCTACGATAAAGCCTTTGTGCGTGTGCACCCGCATTCGCTGTACCAGGTTGTAGAAGTTGATGAGTTGGGCTTTGCCTTCTTAGACCGTGTGAATGCGCGGTATCTGAACGGTGATGTTCAGCTGAACCAGTATCTGAAAATCAAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a93166448ac41564679407f69fe628184c837a05c809a98b6cabbee0cbc20439
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_9 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank