Protein

View in Explore
Genbank accession
QCW23079.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MSRASTLSGFSTAIGQPTDLNVGVVTATRIDADNITASNTYEFNNLSITGIATFSDTVSIGSTLVGVTTISSSGIHSPLGVGTFLSVDTRTLLGNVSVAGTLTYEDVTNVDSLGIITTRGGIHVTGAGSSVGIGSTGPEVSLDVSQNTDAIGLPKGTTAQRPTGVEGFIRFNSTSKALEIYDGTNWVEIITDYFPSGSVILG
Physico‐chemical
properties
protein length:202 AA
molecular weight: 20614,59060 Da
isoelectric point:4,36117
aromaticity:0,05941
hydropathy:0,20792

Domains

Domains [InterPro]
DC_1568
ATT
81–202
DC_1568
IPR059888
RBD
132–191
IPR059888
QCW23079.1
1 202
Architecture
ATT
ATT 81-202
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW23079.1
1 202
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,6741
Central domain 23 191 170 0,4534
C-terminal 192 202 10 0,9669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-191
C-terminal
192-202

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW23079.1 [NCBI]
Genbank nucleotide accession
MK799832 [NCBI]
CDS location
range 192954 -> 193562
strand +
CDS
ATGTCTAGAGCAAGTACATTATCAGGTTTTTCAACTGCTATAGGGCAACCTACCGACCTGAATGTTGGTGTGGTTACCGCAACTCGTATTGACGCTGATAACATCACAGCATCAAATACTTATGAATTCAACAACTTAAGTATCACTGGTATCGCAACATTCAGTGACACTGTAAGTATTGGTTCCACATTAGTCGGTGTTACCACCATCAGTTCAAGTGGTATTCATAGTCCACTTGGTGTTGGTACATTCCTCAGTGTAGACACCAGAACTCTTTTAGGCAATGTATCAGTTGCTGGTACACTAACTTATGAGGATGTCACCAACGTTGATTCACTTGGTATCATCACTACACGAGGTGGTATTCATGTCACTGGTGCAGGTAGTTCGGTAGGTATTGGAAGCACTGGACCTGAAGTCAGTCTTGATGTTTCACAGAACACTGATGCTATTGGACTTCCAAAAGGTACAACAGCACAGAGACCCACAGGTGTGGAGGGTTTCATTAGATTCAATAGTACAAGTAAGGCGTTAGAGATATACGACGGTACAAACTGGGTAGAAATCATTACTGATTACTTCCCATCAGGTTCAGTAATTTTAGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc1749b93dd31f09b8782965fe4d2d3180d9378c96e04529e00b9ac87d93cb7e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6546
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank