Protein

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Genbank accession
YP_009792408.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALVDLVRAGGYSIEYPQFSSMAKLKAFPHSEDGQLVRLLSWHEGVGLGGGLFKVSTSSTATGNDGTVVVASNGVRLLRVVNGPIWADMFGALPNSDIDSMPAVAAAYAYAASVNTDLYIGVATYKFKGSTPINVDPSRAGIIGYQGKVRIDCSEFTGSVVFSINSSYSYTPAAYYNNLSPALQGLYVLGAKTSGVDGLLVGRETVGSDKSYNGQTEVRECTFDKFDRNIRMGHNSWRFVFYKVNSLNALSPNGILYVPAGLDDSGEILSFYHCQFFDGAGSNIRLSCSSYIMVFNTCSFLNITFFVDSASSATVTCNGCNFENPGSASTRRSTRRYVDISAGHTNVFNIIGGSIVTNSNPGQTQALLYVSTNNLLNLVGVTVPYGGHYQQEQELGYHAFIGGAGTVTTSGVMLQLLNGAGTCPLHSSLSTFSNWDFGYGNLNAWTVDKGTGTSSVVEYLANAGPKGTEGAMRVAPVSVGTNVSQVQAVTNPGMFSMSCMVNIATTSGNAGQISIGFLDAAGNRLPGGVSANLGTTTGWKVIGKNTLRGKVPIGAKQIRVNIQTVAGADVKYAYLLCNVVK
Physico‐chemical
properties
protein length:581 AA
molecular weight: 61342,42590 Da
isoelectric point:8,21168
aromaticity:0,09811
hydropathy:0,06024

Domains

Domains [InterPro]
IPR059934
RBD
18–81
IPR059934
DC_0903
STR
20–575
DC_0903
YP_009792408.1
1 581
Architecture
STR
STR 18-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009792408.1
1 581
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9877
Central domain 99 423 326 0,9894
C-terminal 424 581 157 0,9929
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-423
C-terminal
424-581

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phiKpS2
[NCBI] 		1897515 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009792408.1 [NCBI]
Genbank nucleotide accession
NC_047857 [NCBI]
CDS location
range 42279 -> 44024
strand +
CDS
ATGGCACTAGTAGATTTAGTGAGGGCTGGGGGATATTCTATTGAGTACCCGCAATTCTCCAGTATGGCTAAGCTAAAAGCATTCCCACACTCTGAGGACGGGCAACTTGTTAGGCTGTTGTCTTGGCATGAGGGGGTTGGTTTAGGTGGTGGGCTGTTCAAGGTCAGCACCAGCAGCACCGCTACAGGTAACGATGGTACGGTAGTAGTGGCTAGTAATGGGGTGCGGCTGCTTCGAGTAGTAAACGGACCTATCTGGGCAGATATGTTTGGTGCACTGCCGAATTCAGATATAGACAGTATGCCAGCAGTGGCTGCGGCTTATGCGTACGCTGCTTCTGTGAATACGGACCTGTATATCGGTGTGGCGACTTACAAATTCAAGGGTAGCACTCCAATTAATGTAGACCCATCCAGGGCCGGTATTATTGGCTATCAAGGTAAGGTGCGCATTGACTGCTCCGAGTTTACTGGCTCGGTTGTGTTTTCTATAAACAGCAGCTATAGCTATACCCCAGCAGCCTACTACAACAACCTTAGCCCGGCCCTGCAGGGGCTCTATGTGCTTGGTGCTAAAACGTCCGGAGTAGACGGACTACTGGTTGGCAGGGAAACAGTAGGGTCGGACAAGAGCTATAACGGGCAGACAGAGGTTCGTGAGTGCACGTTCGATAAGTTTGACCGCAACATCCGAATGGGGCACAACTCTTGGCGCTTTGTGTTCTACAAAGTAAACAGCCTAAACGCTCTCAGCCCTAACGGGATATTGTATGTACCGGCCGGACTAGATGACTCTGGGGAGATTCTGTCGTTCTACCACTGCCAGTTCTTCGATGGTGCAGGTAGTAATATCCGCTTGTCTTGCTCCTCGTACATTATGGTATTTAATACCTGCTCGTTCCTGAACATCACGTTCTTTGTGGATTCGGCGAGTAGTGCGACAGTAACCTGTAACGGATGCAACTTCGAAAACCCTGGAAGTGCTAGTACCCGTAGAAGTACCCGTAGATACGTGGACATTAGTGCTGGGCACACTAACGTATTCAACATTATCGGGGGCAGTATAGTTACAAACAGCAACCCTGGACAGACTCAGGCGCTGCTGTATGTCTCTACCAACAACCTACTGAACCTTGTAGGTGTAACTGTTCCTTACGGCGGGCACTACCAGCAGGAGCAGGAGCTCGGGTATCACGCATTCATCGGAGGGGCCGGTACAGTCACAACCTCTGGGGTTATGCTGCAGCTACTCAACGGGGCGGGTACGTGTCCTTTGCACTCTAGTCTTAGCACGTTCAGTAACTGGGATTTTGGTTATGGGAACCTGAATGCTTGGACGGTAGATAAGGGGACTGGTACATCCTCTGTGGTAGAGTATCTGGCTAATGCTGGACCTAAAGGTACAGAGGGAGCTATGCGAGTTGCTCCTGTAAGTGTCGGTACCAACGTATCGCAAGTACAGGCAGTAACTAACCCCGGCATGTTCAGTATGTCCTGCATGGTGAACATTGCGACGACCTCCGGTAACGCAGGGCAGATATCTATTGGGTTCTTGGATGCTGCAGGTAACCGCCTGCCTGGTGGGGTCTCGGCTAACCTGGGCACTACCACGGGTTGGAAGGTAATCGGCAAGAACACCTTGAGGGGCAAAGTCCCAATCGGTGCAAAGCAGATTCGTGTGAACATTCAGACCGTGGCCGGTGCAGACGTTAAGTACGCGTACTTGCTGTGCAACGTGGTCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f623ea5dc02f3ad37d5deef3f43bcbd7a0365a86aa04a591540b31956e0a8ac5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8325
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Klebsiella pneumoniae bacteriophage and its effect on 1,3-propanediol fermentation Shen,J., Zhou,J., Xiu,Z., Mu,Y., Fu,H., Sun,Y. and Xu,Y. 2016-10 — GenBank