Protein

View in Explore
Genbank accession
XVB82699.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MYKQIFNKANGAPKLIESEYFDKEQFTDIQPPNGLYQPIHFDGDKWIGTQYDEWIKLQPKEDVELIPDEKDEIIANLSIQVLETETKISSIQEDVANLTIQLLERE
Physico‐chemical
properties
protein length:106 AA
molecular weight: 12383,73610 Da
isoelectric point:4,34519
aromaticity:0,09434
hydropathy:-0,64245

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi116
[NCBI] 		3414228 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB82699.1 [NCBI]
Genbank nucleotide accession
PV389079.1 [NCBI]
CDS location
range 28570 -> 28890
strand -
CDS
ATGTACAAACAAATATTTAACAAAGCAAATGGTGCACCGAAACTCATAGAGTCTGAGTATTTCGACAAAGAGCAATTTACAGATATACAGCCACCTAATGGTCTGTATCAGCCCATACATTTTGATGGTGATAAATGGATAGGAACACAATATGATGAATGGATAAAGCTTCAGCCAAAAGAAGATGTTGAATTAATACCTGATGAAAAAGATGAGATTATTGCTAACTTGTCAATTCAAGTATTAGAAACAGAAACTAAAATATCATCTATACAAGAAGATGTTGCAAACTTAACAATACAATTATTGGAGCGTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8ae64340315534e7c3e14a0bec5a59f208302072311d5de292745005bd88922
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank