Protein

View in Explore
Genbank accession
QBX23785.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSGEVISARVRHKGMTKSEWESSGIILPKGELVYETDTGHSKFGDGESQYKDLMYQDGPQGKTGETGPQGPPGQQGQKGKTGDTGPQGPPGPTGEQGPKGDTGAKVTSGTLADGQLTLSLNDGSQAVVKGDFRGPKGPVGPQGPKGADGKMTFEQLTEEQREQLKGPKGDTGQRGAAGPMGPRGERGPAGDPAALPYDVVRRGELSGYVRQADIRSLINNAGKLKDETTGQYLSVRVVDKGSVPHNTSGMIVFERAGGK
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26926,51560 Da
isoelectric point:7,83583
aromaticity:0,04247
hydropathy:-0,89884

Domains

Domains [InterPro]
SSF69349
STR
8–256
SSF69349
IPR041352
ATT
10–47
IPR041352 PTHR24637
IPR008160
STR
58–108
IPR008160 G3DSA:1.20.5.320
G3DSA:1.20.5.320
STR
76–129
G3DSA:1.20.5.320
QBX23785.1
1 259
Architecture
ATT
STR
ATT 8-47 | STR 48-256 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan150
[NCBI] 		2548008 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23785.1 [NCBI]
Genbank nucleotide accession
MK448855.1 [NCBI]
CDS location
range 27586 -> 28365
strand +
CDS
ATGTCAGGAGAAGTGATATCTGCCAGAGTCAGGCATAAAGGCATGACAAAAAGCGAGTGGGAATCTAGTGGCATTATCCTACCCAAAGGCGAGCTTGTCTATGAGACTGATACTGGTCATAGCAAGTTTGGCGATGGCGAAAGCCAATACAAAGATTTAATGTACCAAGACGGTCCCCAAGGTAAAACTGGAGAAACTGGCCCTCAGGGTCCTCCTGGCCAGCAAGGACAAAAAGGCAAGACTGGTGATACAGGTCCGCAAGGTCCTCCTGGCCCCACAGGAGAGCAGGGTCCTAAAGGTGACACTGGTGCTAAAGTAACTAGTGGCACGCTAGCAGATGGACAATTAACACTTAGCCTAAATGATGGCTCACAGGCTGTTGTCAAGGGCGATTTTAGAGGTCCTAAAGGCCCAGTAGGCCCACAAGGACCTAAGGGTGCTGACGGTAAAATGACCTTTGAACAGCTCACCGAGGAGCAACGTGAGCAATTAAAAGGGCCTAAAGGTGACACTGGTCAAAGAGGAGCGGCGGGTCCAATGGGTCCAAGAGGTGAACGGGGACCAGCAGGAGATCCAGCGGCTTTGCCTTACGACGTTGTACGACGAGGGGAGCTATCAGGCTATGTCAGACAAGCTGATATACGATCGCTGATTAACAACGCAGGCAAACTCAAAGACGAGACGACAGGACAATATCTATCTGTCCGTGTGGTGGATAAAGGTAGTGTGCCGCATAATACCTCAGGCATGATTGTTTTTGAGCGGGCTGGAGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a111479267008825e9dc254f43c998361007e2dd67802a93fcc477421105bfa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank