Protein

View in Explore
Genbank accession
BDD79324.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASKKKRGGRDDFDFDSDLDFDIPDFGGDNPEATSKSRKPISVGLKSAAAGFGKTFANEARLRKTLTKSLPKEYEEPISKAFEIKDGFRDLYNTSSSQASEIVRETKRSVGRITRNLESALPKKLAEKLKAWGDSADSDTVGNLSKSEVEQGTIDSAFASIFAQTQQAQADNEKKRDARQVIQDQIDQKRHKDMTSILGSIDNSLLQLATFQDKIQTNYMKKSLELQFRSYFVQNDMLALQTKFFDEFKKDLQAITKNTGLPDYVKKAPKEALMELMRQKTFDSLSNTISKKRNQWLSGVFKKAQGKISETLGNVKDGLGMVLDGVETGSSMYGSGFGPSGEELVGDLAGGFAGNKAQDWLAKKIRAQMVKNPKAVKFGNKANQVLSNLPQWMGNQLENGKYADKIPEWLKDILKPDTESSGVNLSREVDLDRAARWSDKNSRSLNVVIPELLSKIHHELYVTRTGDVSAKPLAYDYEKGKFVTSKERQAQLADTIVSNRTKESTKHQVDNIFKEIDPKGEIDPKTRKAIAARIYGANKRNVYFDKDNILSHEVLGDHDDARRKFEEYLENDEQGHKERRLTNMFGRVGGDNGEVKDVIQDLIDQGRHGELADMGLLDLKTGRINMEKVREMELSHVGKTVKSANGNIFSGGNVQMFAKGGAFTNKIVRRPTAFPMKGGKTGIMGEAGPEAIMPLSRDKDGRLGVKVQKGKTEQAVEEILGILKRFEAKGFGGGMMDPEMLEAYLSGKMDDAKGYFGKGGAALKKLGLGAAGSIWGGAKNSYRRSRIMARKAKKMVFGGGASALDWLGKQKDKFDLYIGNEVEPRLSKMKLEAGRYVDAKTGKVIEKYEDIKGDIKDLDTDEIVLRATEIKDGILKNFETGKSVLLRLTGWGKSAIKQAYEKTKATIAKATGLSKLLSSTAYNSVKKAYEFYTDGPQDVYLKDQYETPVLLKRIMAQGLYFDKATLDPISKVSQIKGPVVDNEENVLITKEDLANGLYDKEGKEIKTGFDKIASFVGASIKGAIGTYKKLLGKGKDMGMRAMAWLKNLFGFDSPFTVFSSRTNDILTAMYAMLNDRLPGERSPDLDSMIGKGSSGSTKDTVNKAGKAAGAFKEGFMKRWNKGKDQAQAKADELKARLPGDIENAKQKARDLHGQASDKLNEWKDEHWDKAEQQVREKLGRGKDRVVDGLHAVVDTLRARLPEQKAKVEGDSNGDGVRDGSIDDLRAKRAKVKEEKEKEKKEAEQSAEKGSTKGAWAALSAFFKKNKGEDEEKGDHSLLEDAEDLVGGGNGGKAEKAGKGLKKASRWERMMPKGKGLGSKLLRGGMKAIGGIGKLGLKFGGALLGGGLLSAETLLGGLSLVGSALGMTATAIGAIISSPVTVPLLVAAGVGAAGYFAYKWLTKPDPQPIEKVRLVQYGFKANDIEAYKKMKSLEQQLAPAVVFKGEKAEFDPKKVDLKQAMKLYGLNPESKDDAEKFVSWFADRFRPVYLQHRALIVTSKSPKPLEDVDDNKPDFKQSYLDQCLFPGGHYNVTTNPFKGKDYLPTAQYSVEQQIKAAKEEVEKEGSKKQDTNKADAPKPAGGVAAAALAKNEADKKAHEADQKKNDSTLTPAQKDPRHDSDKVMAQNRLAAATVGANEGPGGPGRQPGDPITGPSGPDGSAKPAKSKPGVKPMSGAAALVKETLLKDMPKYGITSPNQQAALLGNIEHESGFMPISENLNYKPTQLMKLWPNRFPDSGKAQQVASQGPQGIANNIYGGRMGNTDTNDGWDYRGRGPLQITGKSNYAAVGKAMGKDIVNDPDKLITDPQTAADSALAYWKLNPALGKNADAGNFQKVRQMINGGGIGADDANARVQSYLDKIKNGELQVGGSSSGPGGTITPTGTVDSPKPSTANVASNPNSGPAPDAYRQASKAEPTATTPSQLVSSPRPTYDPSSGGGAAMSSSSAPSQNAYVQRNTQLNAGDSLDIMKQGLKESQTQTGLLQRIADGIDKLNSRFDKNMGGGDSQTPAAGSDEKSNYGKPPAPMTAPSLGFRRQLANV
Physico‐chemical
properties
protein length:2039 AA
molecular weight: 221414,10190 Da
isoelectric point:9,32447
aromaticity:0,06572
hydropathy:-0,67205

Domains

Domains [InterPro]
DC_0337
STR
1–1636
DC_0337 G3DSA:1.10.530.10 DC_1014
Coil
Unmapped
1116–1136
Coil Coil Coil Coil IPR023346
IPR052354
Unmapped
1691–1842
IPR052354
IPR000726
ENZ
1762–1819
IPR000726
BDD79324.1
1 2039
Architecture
STR
STR
RBD
STR 1-1636 | STR 1675-1866 | RBD 1867-2039
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC8
[NCBI] 		2906466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79324.1 [NCBI]
Genbank nucleotide accession
LC667450.1 [NCBI]
CDS location
range 40393 -> 46512
strand +
CDS
ATGGCGTCTAAAAAGAAACGCGGCGGGCGCGATGATTTCGATTTCGATAGCGACTTGGACTTTGACATTCCTGACTTCGGGGGCGATAACCCCGAAGCCACGAGTAAGAGTCGTAAACCGATTTCTGTTGGCCTTAAGTCAGCAGCGGCAGGGTTTGGCAAGACGTTCGCCAATGAGGCACGTCTGCGTAAAACTCTGACGAAATCACTGCCCAAAGAGTACGAAGAACCGATCTCGAAAGCATTCGAGATCAAAGATGGGTTTCGGGATCTATACAATACCAGTTCGTCCCAAGCCAGCGAAATCGTTCGTGAGACCAAACGTTCAGTCGGGCGGATCACGAGAAACCTGGAGTCTGCACTTCCCAAAAAGCTGGCTGAAAAGCTCAAAGCGTGGGGCGACTCTGCTGATTCGGATACCGTAGGTAACCTGTCGAAAAGTGAAGTAGAGCAAGGCACGATCGATTCGGCCTTTGCATCCATCTTCGCCCAGACTCAGCAGGCTCAGGCTGATAACGAAAAGAAGCGCGACGCACGTCAGGTCATTCAGGACCAGATCGATCAAAAGCGTCATAAGGACATGACGTCTATCCTGGGGTCGATTGACAACTCGCTTTTGCAGTTGGCAACATTCCAGGATAAGATCCAGACCAACTACATGAAGAAGTCGTTGGAGCTTCAGTTCCGTTCGTACTTTGTACAGAACGACATGCTGGCGCTTCAGACGAAGTTCTTTGACGAATTCAAGAAAGACCTTCAGGCGATCACGAAGAACACAGGGCTTCCTGATTACGTCAAGAAGGCGCCGAAAGAAGCTCTCATGGAGCTCATGCGGCAAAAGACCTTCGATTCGCTTTCGAACACCATTTCCAAAAAGCGTAACCAGTGGCTCTCCGGCGTTTTCAAGAAAGCGCAGGGTAAGATCTCCGAGACACTCGGTAACGTCAAGGACGGCCTGGGAATGGTTCTCGACGGGGTTGAAACCGGCTCCAGTATGTATGGTTCTGGTTTCGGTCCGTCGGGTGAAGAACTTGTCGGCGATCTCGCTGGCGGTTTCGCGGGGAACAAAGCACAAGACTGGTTGGCTAAGAAGATTCGGGCCCAGATGGTCAAGAATCCGAAAGCAGTCAAGTTCGGGAACAAAGCCAATCAAGTCTTATCAAATCTGCCGCAGTGGATGGGCAACCAGCTGGAAAACGGCAAGTACGCTGACAAGATTCCTGAATGGCTGAAGGATATCCTCAAGCCCGATACGGAGTCCTCTGGCGTCAATCTGAGCCGTGAAGTCGATCTCGATCGTGCAGCACGTTGGTCGGATAAGAATTCGCGTTCTCTGAATGTCGTGATTCCGGAACTGCTCTCGAAGATCCATCACGAGCTCTACGTTACCCGCACGGGCGACGTAAGCGCTAAACCTTTGGCGTATGACTACGAAAAGGGCAAGTTCGTCACATCGAAAGAACGTCAGGCTCAACTGGCGGACACGATTGTTTCGAACCGTACGAAAGAATCGACGAAGCACCAGGTCGACAACATCTTCAAGGAAATCGATCCGAAGGGTGAGATCGATCCGAAAACTCGTAAGGCGATTGCTGCACGCATTTATGGCGCTAACAAACGCAATGTCTATTTCGACAAAGATAACATCCTGTCGCATGAAGTACTGGGCGATCACGATGATGCACGTCGCAAGTTCGAAGAGTATCTCGAAAACGACGAGCAGGGCCACAAAGAACGACGTCTCACTAACATGTTCGGTCGTGTTGGCGGAGACAACGGTGAAGTCAAGGATGTGATCCAGGATCTTATTGACCAAGGACGCCACGGCGAACTGGCCGATATGGGATTGCTGGATCTGAAGACTGGCCGTATCAACATGGAAAAAGTTCGCGAGATGGAACTGAGTCATGTTGGTAAAACTGTGAAGTCTGCAAATGGTAACATCTTCTCGGGCGGTAACGTCCAGATGTTTGCCAAGGGCGGTGCATTCACGAACAAGATCGTACGTCGTCCTACCGCTTTCCCGATGAAGGGTGGAAAGACAGGTATCATGGGCGAAGCAGGTCCTGAAGCGATCATGCCTTTGTCGCGTGACAAAGATGGTCGTCTGGGCGTTAAAGTCCAGAAGGGCAAAACTGAACAAGCCGTTGAGGAAATCCTCGGCATCCTGAAACGCTTCGAAGCGAAAGGCTTTGGTGGCGGTATGATGGATCCTGAAATGCTCGAAGCTTATCTGTCTGGCAAGATGGATGATGCCAAGGGTTATTTCGGTAAGGGCGGTGCAGCCCTCAAGAAGCTGGGTCTGGGCGCGGCAGGTTCCATTTGGGGCGGCGCCAAGAACTCCTATCGTCGCAGCCGCATCATGGCTCGTAAAGCCAAAAAGATGGTTTTCGGCGGTGGCGCCTCCGCTCTTGACTGGCTGGGTAAACAGAAAGACAAATTCGATCTGTATATCGGTAACGAAGTCGAGCCTCGTCTGTCAAAGATGAAGCTCGAAGCTGGCCGATACGTCGATGCGAAGACCGGTAAGGTCATCGAGAAGTACGAAGATATCAAAGGCGACATCAAAGATCTTGATACGGATGAGATCGTTCTCAGGGCCACTGAGATCAAGGACGGTATTCTCAAAAACTTCGAGACGGGTAAGTCGGTGTTGTTGCGACTGACTGGCTGGGGTAAATCTGCGATCAAGCAAGCATACGAAAAAACCAAAGCGACCATTGCGAAAGCGACGGGTCTCTCCAAGCTTCTCTCTAGCACGGCTTACAACAGCGTGAAGAAAGCTTATGAATTTTACACGGACGGGCCACAAGACGTGTATCTGAAGGACCAGTACGAAACACCGGTTCTTCTCAAGCGCATCATGGCGCAAGGATTGTATTTCGATAAAGCAACTCTCGATCCGATCTCGAAGGTGAGTCAGATCAAGGGTCCTGTTGTCGATAACGAAGAAAATGTCCTTATCACCAAGGAAGACTTGGCCAATGGTCTGTACGACAAGGAAGGTAAGGAAATCAAGACCGGCTTTGACAAGATTGCATCTTTCGTAGGTGCATCTATCAAGGGCGCGATTGGAACCTACAAGAAGCTGTTGGGTAAGGGCAAGGACATGGGGATGCGAGCGATGGCTTGGCTCAAGAATCTCTTTGGCTTTGATTCGCCCTTCACAGTCTTCAGCAGCCGTACGAATGACATTCTGACGGCAATGTATGCCATGCTCAATGATCGCTTGCCTGGCGAGCGCTCACCTGACCTGGATTCCATGATTGGCAAGGGTTCGTCTGGTTCTACCAAGGACACTGTCAATAAGGCTGGCAAAGCCGCGGGAGCTTTCAAAGAAGGCTTCATGAAGCGCTGGAATAAAGGTAAGGATCAGGCACAGGCTAAAGCCGATGAACTCAAGGCGCGTTTGCCGGGAGATATCGAGAACGCCAAACAGAAAGCACGTGACCTCCATGGTCAGGCTTCTGACAAACTGAACGAATGGAAAGACGAGCATTGGGATAAGGCAGAGCAACAGGTTCGTGAAAAGCTTGGTCGAGGGAAGGACCGAGTTGTAGACGGACTGCATGCTGTTGTCGACACCCTGCGCGCGCGTCTGCCCGAACAGAAAGCCAAGGTTGAAGGCGATAGCAATGGCGATGGTGTTCGCGATGGTTCCATCGATGACCTCCGTGCCAAACGTGCTAAAGTCAAGGAAGAAAAAGAGAAGGAAAAGAAGGAAGCCGAACAGTCTGCTGAAAAGGGCAGTACCAAGGGCGCCTGGGCGGCATTGTCCGCATTCTTCAAAAAGAATAAAGGCGAGGACGAAGAGAAGGGTGATCACTCTCTCCTCGAAGACGCCGAGGATCTCGTAGGCGGCGGTAATGGCGGCAAGGCTGAGAAAGCCGGTAAGGGCCTGAAGAAGGCTAGCCGTTGGGAAAGGATGATGCCTAAGGGCAAAGGCTTGGGTTCCAAGCTTCTGCGTGGCGGCATGAAAGCAATCGGCGGTATTGGCAAGCTCGGCCTGAAGTTTGGCGGCGCTCTCCTGGGCGGTGGTTTGCTTAGCGCGGAAACGCTGCTGGGTGGGTTGTCGCTCGTGGGTTCTGCTCTGGGCATGACTGCCACTGCAATCGGTGCAATCATTTCGTCTCCCGTTACCGTTCCGCTCCTGGTAGCTGCTGGTGTTGGTGCCGCAGGGTACTTCGCCTATAAGTGGCTTACCAAGCCGGATCCTCAACCAATCGAAAAGGTACGACTCGTGCAGTATGGCTTTAAGGCCAACGACATCGAAGCGTACAAGAAGATGAAGAGTCTGGAGCAGCAACTTGCCCCAGCAGTAGTCTTCAAGGGTGAGAAGGCAGAATTCGATCCCAAGAAAGTTGATCTGAAGCAGGCGATGAAGCTTTACGGCTTGAACCCGGAAAGCAAGGACGATGCGGAGAAGTTCGTGTCGTGGTTCGCTGATCGCTTCCGTCCGGTCTACCTCCAACACAGAGCGCTGATCGTGACATCGAAGTCTCCGAAGCCTCTGGAAGACGTTGACGATAACAAGCCTGATTTCAAGCAGTCCTATCTGGATCAGTGTTTGTTCCCGGGTGGTCATTACAACGTCACGACCAATCCCTTCAAGGGCAAGGACTATCTGCCTACCGCGCAGTATTCGGTGGAACAGCAGATCAAGGCCGCGAAGGAAGAAGTCGAGAAAGAAGGCTCCAAGAAACAAGATACCAACAAGGCTGATGCTCCGAAGCCTGCTGGAGGTGTAGCTGCCGCCGCTCTCGCTAAAAACGAAGCGGATAAGAAAGCACACGAAGCTGATCAAAAGAAGAATGATTCGACCTTGACTCCTGCCCAGAAAGATCCGAGGCATGATTCCGACAAGGTCATGGCGCAAAATCGCCTGGCTGCTGCAACTGTTGGTGCTAACGAGGGCCCCGGAGGCCCCGGCCGTCAACCTGGAGATCCGATTACCGGACCTTCTGGCCCTGACGGATCTGCTAAACCGGCAAAGTCCAAACCTGGCGTTAAGCCGATGAGCGGTGCCGCAGCACTGGTGAAAGAAACACTCCTGAAAGACATGCCGAAGTACGGGATTACTTCCCCGAACCAGCAGGCTGCCCTCCTGGGCAATATCGAACACGAATCCGGTTTCATGCCGATTTCGGAGAATCTGAATTACAAGCCCACCCAGCTGATGAAGTTGTGGCCTAACCGTTTCCCTGATTCGGGTAAGGCTCAGCAAGTTGCATCGCAAGGTCCTCAAGGCATTGCGAACAACATCTACGGCGGTCGGATGGGCAACACGGATACCAACGATGGTTGGGATTACCGTGGTCGCGGCCCTCTCCAGATTACTGGTAAGAGTAACTACGCGGCTGTCGGTAAGGCGATGGGTAAAGACATCGTCAATGATCCGGACAAGCTTATCACCGATCCTCAGACCGCAGCTGACTCTGCTCTGGCCTACTGGAAACTCAACCCTGCGCTCGGTAAGAACGCAGACGCTGGGAACTTCCAGAAAGTTCGACAGATGATCAACGGTGGTGGTATCGGAGCAGATGACGCAAATGCACGCGTGCAGAGTTATCTGGACAAAATCAAGAATGGCGAACTGCAAGTGGGTGGTTCGTCGTCTGGCCCTGGCGGTACGATCACTCCTACGGGAACGGTCGATTCGCCTAAGCCTTCTACAGCTAACGTGGCGTCGAATCCGAATTCGGGTCCGGCACCTGATGCTTACCGACAAGCGTCCAAGGCTGAACCGACTGCGACGACTCCGTCTCAATTGGTTAGCTCTCCGCGTCCGACGTATGATCCGAGCTCTGGTGGTGGTGCGGCCATGAGTTCGAGCTCTGCGCCTTCGCAAAACGCTTACGTACAACGCAATACCCAACTGAACGCTGGTGATTCCCTTGACATCATGAAGCAAGGTCTCAAGGAATCGCAAACTCAGACTGGGCTTCTCCAACGCATCGCAGATGGTATCGACAAACTCAACTCCAGATTCGATAAGAACATGGGCGGTGGAGATAGTCAGACGCCAGCTGCCGGTAGCGACGAGAAGAGTAACTACGGCAAGCCTCCCGCTCCGATGACGGCGCCGTCATTGGGATTCCGCCGACAACTTGCTAACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d363eeccd2e7e312de4dcf85c76acea6813c68d5d1fc6d7ac304fd3d0862d5eb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank