Protein

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Genbank accession
WPJ68372.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTSAVEASAASAAAAKGSEIAAKDSENKAKDSEIMAGIYADSSQTSATQSAASAAESEKQARLSQKSADASATSAEESKGFRDSAELAAQNAENSRRLAEQAKTAAQQAQTAAETAKAGAETAKAGADAAATTAGEHAAAAKQSELNAKTSETNAAGSATKAEGKAIDATTEADRAKAEADRATQIVDSKLDKEDISGFIKVYKTKAEADADVGSRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVEIEQKLVSINNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTEEQWQAGATLYFSTGDGSTTFRLPDMMQGQAFRAPIKGEEDGGAIKDQIPYITTVNGIGPADDTGAIKLPYVAMVNGTIIPDGNGNLVLGNVVTKNVWNGTDGEVLLRGAFGLGGVGITLNEPNIVSFFKAMRAFGSGYYRNDIAVDGLPAYSAGFYSRTADTNSFICSGYGSAVVFAAAINDAGLDSENPIVHTNILYGTVNKPDLNGDTQGVLSLAKGGTGATTVSSAKTNLEVDRVKQLEGGTHITSQDQNIVFMVQDTKNWGVYDHSENKWVSLPVEHGGTGATEPAQARKNLEAASAGINLDITQLRNLEGWPISIKNGSVISRKYHTVPSAGSYVGSEVFSAQVQLDNSVDPDTPRLEALFYSEGNYGQSLTERATIAAYRRTADGSLTATKYANLYMDSGAWNAERMHTQGYQKPWDGDSFGFFAPFQASDVVDNDHGFVPIISARTQSTGGYPMRATTGLIANGPAAWPAYVFRLRGDSNWACTYQFHMSGDIDGWAVDYNNVVSNFTYTKNAVSDINLKDNIQDVSGEESLENIEKMEFKKFTYKFDKKKNIRRGVIAQQLELIDPQYVKAIGNPETDDITLTLDTNPLLMDALAAIKVLSERNKSLEAQLQKMSTVIDNINEKLDLMTRLSNLEAELDKMKGTS
Physico‐chemical
properties
protein length:1027 AA
molecular weight: 109651,39760 Da
isoelectric point:4,80383
aromaticity:0,07400
hydropathy:-0,35073

Domains

Domains [InterPro]
DC_0608
ATT
2–593
DC_0608 IPR030392
Coil
Unmapped
125–155
Coil Coil DC_0195
IPR030392
CHP
896–951
IPR030392 Coil
WPJ68372.1
1 1027
Architecture
ATT
STR
ATT 2-593 | STR 594-1027
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ68372.1
1 1027
Domain Start End Length (AA) Confidence
N-terminal 1 512 512 0,8744
Central domain 513 711 200 0,3254
C-terminal 712 1027 315 0,8761
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-512
Central
513-711
C-terminal
712-1027

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STP-SP2
[NCBI] 		3079573 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella paratyphi
[NCBI] 		54388 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ68372.1 [NCBI]
Genbank nucleotide accession
OR485018.1 [NCBI]
CDS location
range 92976 -> 96059
strand +
CDS
ATGGCGCTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGAAATTCTATTAGCTCTATTACTGCTGGTGAATTAACTTCTGCTGTAGAAGCCTCCGCTGCTTCTGCGGCAGCAGCAAAAGGTTCTGAAATTGCTGCTAAAGATTCTGAGAATAAAGCAAAAGACTCCGAAATTATGGCGGGTATCTATGCAGATTCTTCCCAAACATCAGCTACTCAATCTGCAGCTTCAGCAGCAGAATCTGAGAAACAGGCTAGATTATCCCAGAAGAGTGCAGATGCTTCTGCTACATCAGCGGAAGAGTCTAAAGGATTTAGAGATTCTGCTGAACTAGCTGCTCAGAATGCTGAGAACAGTCGTAGACTTGCAGAACAAGCTAAAACTGCTGCTCAACAAGCTCAGACAGCGGCTGAAACTGCTAAGGCTGGCGCTGAAACCGCAAAAGCTGGAGCAGATGCTGCTGCTACAACTGCTGGAGAACACGCTGCTGCTGCTAAGCAATCAGAATTAAATGCTAAAACTTCTGAGACTAATGCTGCGGGTTCTGCTACCAAAGCTGAGGGCAAAGCTATTGATGCTACTACTGAGGCAGATCGTGCTAAAGCTGAGGCAGATCGTGCAACTCAGATTGTTGATAGTAAGTTGGATAAAGAAGATATATCTGGCTTTATCAAAGTCTACAAGACTAAAGCCGAAGCCGATGCTGATGTTGGAAGTCGTGTACTAGGGGAGAAGATCCTAGTATGGAATCAAACTGATTCAAAATATGGGTGGTATAAGGTCGCTGGTACTGCTGAGGCTCCTGTTCTAGAATTAGTAGAAATAGAGCAAAAGCTAGTTTCTATTAATAACGTTCGTGCAGATGACGCGGGTAACGTACAGATTACTCTTCCTGGCGGTAACCCCTCTTTATGGCTGGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGCTACCCTGGTGTTCTTCCTGCTGATGGTCGTGAAGTTCTTCGTGTAGACTACCCAGATACTTGGGAAGCTATCGAAGCTGGCTTAATCCCCTCTGTTACGGAAGAACAATGGCAGGCTGGTGCAACACTCTACTTCTCCACTGGTGATGGCTCTACAACCTTCCGTTTACCAGATATGATGCAAGGGCAGGCTTTCCGTGCACCTATTAAGGGAGAAGAAGATGGTGGTGCTATCAAGGACCAAATCCCTTATATCACTACTGTGAATGGAATTGGTCCTGCTGACGATACTGGAGCTATTAAGCTTCCTTACGTGGCGATGGTTAATGGAACTATTATACCAGATGGGAATGGAAACCTAGTACTAGGTAACGTTGTTACTAAGAATGTTTGGAATGGTACTGATGGAGAAGTTCTACTTCGAGGTGCTTTTGGTTTAGGTGGTGTTGGTATTACATTAAATGAACCTAATATAGTATCATTTTTCAAGGCTATGAGAGCTTTTGGTTCTGGGTATTATCGCAATGATATTGCAGTTGATGGCTTGCCCGCGTATTCTGCAGGTTTCTACTCTAGAACAGCAGATACTAACTCATTTATCTGTTCTGGGTATGGTAGTGCCGTAGTATTTGCAGCTGCAATCAATGATGCTGGTTTAGATAGTGAAAACCCTATTGTTCATACTAATATTCTTTATGGTACTGTTAACAAGCCAGATCTAAATGGTGATACTCAAGGTGTCTTAAGTCTAGCTAAAGGTGGTACTGGAGCTACCACAGTTAGTTCCGCCAAAACTAACCTAGAAGTGGATAGAGTAAAGCAGCTAGAAGGAGGAACACATATAACCTCCCAGGATCAAAATATAGTGTTTATGGTCCAAGACACTAAAAACTGGGGAGTATACGACCATTCTGAGAACAAGTGGGTATCTTTACCTGTTGAGCATGGCGGTACTGGAGCTACTGAGCCAGCTCAAGCTAGAAAAAACTTAGAGGCTGCAAGTGCTGGTATTAACTTAGATATTACTCAGCTACGTAATCTGGAAGGTTGGCCTATTAGTATTAAGAATGGTAGTGTTATTTCCCGTAAATATCACACGGTTCCTTCGGCGGGATCTTACGTAGGATCGGAGGTTTTTTCTGCACAAGTCCAGTTGGATAATTCGGTGGATCCAGACACACCTCGTTTAGAGGCGCTATTTTATTCAGAAGGTAATTATGGCCAATCTCTTACCGAAAGAGCTACGATAGCTGCCTATAGACGTACTGCAGACGGTTCCTTAACCGCTACTAAATATGCTAATCTGTATATGGATTCTGGGGCTTGGAATGCAGAGCGCATGCATACTCAAGGATACCAGAAACCCTGGGATGGGGATTCATTTGGTTTCTTCGCTCCTTTTCAAGCTTCTGATGTAGTAGATAATGATCACGGGTTTGTGCCTATTATTAGTGCCAGAACTCAATCTACAGGTGGTTACCCGATGAGGGCTACTACTGGATTAATAGCCAATGGCCCAGCTGCTTGGCCTGCCTATGTATTTAGACTAAGAGGGGACTCTAACTGGGCATGCACCTATCAGTTCCACATGTCAGGGGATATTGACGGATGGGCAGTAGACTATAATAACGTTGTCTCTAACTTTACTTATACTAAAAATGCGGTATCTGATATCAATTTAAAAGATAATATTCAGGACGTATCGGGTGAAGAATCTCTTGAAAATATTGAAAAAATGGAGTTCAAGAAATTCACATATAAGTTTGATAAGAAAAAGAATATTAGACGTGGTGTTATTGCACAACAGTTAGAGTTGATTGATCCTCAATACGTTAAAGCTATTGGCAACCCTGAAACCGACGATATTACTTTAACTCTAGATACCAATCCATTGTTAATGGATGCTTTAGCTGCTATTAAAGTATTATCTGAAAGAAATAAGTCTCTTGAGGCTCAACTACAGAAGATGTCTACTGTTATTGACAACATTAACGAAAAGCTTGATTTGATGACTAGATTATCAAATTTAGAAGCAGAGTTAGACAAAATGAAAGGTACTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a53df49ed11f9b62d11cb6db3e181915476b1c5ace01b33985edd7cc9e802f88
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50