Protein

View in Explore
Genbank accession
ASZ76627.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MPSTGKTPTLGLNKWELTDKPKMNDFNKDNENIENFAAEHKQKMTEVEKKSKSNENRLDALRVGTINRLEWYNSESYTGPGNITSITDAPTKRRGFKWSGMSTGPQTLEIKTLPIEPNSDYVLAFLEDIEGSFTSYEIKLAYTNGGQQYKSIVKQGSTPQSNGYNLKTHKFSIPSGATDTKIQFVVQGATSSTSLKVLNILLARGNVVPDYNLAPEDVLKRLDLLFEKDTSLQNQVNQKAAKTDVLLKVSAPLDRDCNSFKDINTFCTFDTGDGNFKNTPDGTLSQGSAQVFMVVNRGHHSTRLQQEFIYLYPKDSVARYKRNFDGTRWGNWYKEYDSANKPTAEELGVAGVNMPMADTDLNNHKNPGFYWGYQNMVNAPVPNGVAIMEVVKYNNDCVLQRFTSVRADSNHTTYIRTCYSNKWSSWKKIYDEGNKPTPADIGAIPQIPIRITQDLNTFTTPGLYIVDRATHAPQSYGRLLVLGWDNDQKWVTQVFYADITNKVYVRCSTNNTATEWTSWAEQYSTSFKPTPQDIGASPSNHNHNKVYYPIPKQAITDFNSGIAITEGQHLVSSSTAIPNSPPLYAQDGSSIYGILHVYVSVGDSYNGVNNWIWQDFHDTRGNHYWRYKINNADWSPWRAVYNSVNKPTPQAIGAVATEGDGVINGTLELRKADKLIRFATERGWILKQGGTAAETSLDLVSETDGKAFRVLEPSGKKGIYMWVSSGGTQFNVDGNSVYHQGFKPTPSDIGAASSSHNHDSAYLGKTATAANSNKLKNWDLAEGSNNFVGIPFIPHDGVMEVGRMVDFHEPGTNKDFNTRLESINGALKCWQDFSAENLWARKYMRVNDWYGGSEDGRFYYKQDGKGLYTENVENLYVKGSPVAKGDYWDVGDNTRVVSLGGGLRLVRQIVKTGYANSGGGVNYTIHFPKAWNWVLPISLVSHNYNDASNNTSGYCTIDYWNNSYLNGGCYQMVAGKPTQIILTYLATE
Physico‐chemical
properties
protein length:988 AA
molecular weight: 110347,54570 Da
isoelectric point:7,04732
aromaticity:0,11235
hydropathy:-0,59433

Domains

Domains [InterPro]
DC_1938
ATT
4–366
DC_1938 DC_1209 DC_1209
Coil
Unmapped
30–57
Coil DC_1209 cd19958
cd19958
STR
357–430
cd19958
ASZ76627.1
1 988
Architecture
ATT
STR
ATT 4-366 | STR 367-710 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASZ76627.1
1 988
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9588
Central domain 74 273 201 0,4365
C-terminal 274 988 714 0,3932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-273
C-terminal
274-988

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CP3
[NCBI] 		2025812 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASZ76627.1 [NCBI]
Genbank nucleotide accession
MF001357.1 [NCBI]
CDS location
range 23820 -> 26786
strand +
CDS
ATGCCAAGTACTGGTAAAACTCCTACTCTAGGTTTAAATAAGTGGGAGTTAACAGATAAGCCAAAAATGAATGATTTTAACAAGGACAATGAGAACATTGAGAACTTCGCTGCCGAACATAAACAGAAAATGACTGAGGTAGAAAAGAAGTCTAAATCTAATGAGAATAGGCTAGATGCTTTAAGGGTTGGTACTATTAATAGGCTTGAGTGGTATAATTCTGAGTCTTATACTGGTCCTGGTAATATCACATCTATTACAGATGCTCCAACTAAGAGACGAGGTTTTAAATGGTCTGGTATGTCAACAGGTCCACAAACTCTTGAAATTAAAACTCTGCCTATAGAACCAAATAGTGATTATGTATTAGCCTTTCTAGAAGATATTGAAGGTAGTTTTACTAGCTATGAAATTAAACTGGCTTACACTAATGGGGGTCAACAATATAAGAGTATTGTAAAACAAGGTAGTACACCACAGAGTAATGGGTACAACTTAAAAACTCATAAATTTAGTATTCCTTCTGGAGCTACTGATACTAAAATTCAATTTGTGGTACAGGGTGCAACCTCAAGCACATCATTAAAGGTATTAAATATCTTATTAGCTAGGGGTAATGTAGTACCCGACTATAACCTAGCTCCTGAGGATGTGCTAAAAAGATTAGACCTATTATTTGAGAAAGACACTAGTTTACAAAATCAAGTAAACCAAAAAGCTGCTAAAACTGATGTACTTTTAAAGGTTAGTGCTCCCCTGGATAGAGATTGTAATTCATTTAAGGATATTAATACTTTTTGTACCTTTGATACAGGAGATGGTAATTTTAAGAATACCCCTGATGGTACTCTATCCCAAGGAAGTGCTCAGGTATTTATGGTAGTTAATAGAGGTCATCATAGTACTAGATTACAACAGGAGTTTATATACCTATATCCCAAGGATAGTGTAGCTCGCTATAAGAGAAACTTTGACGGAACTCGCTGGGGTAACTGGTATAAGGAATATGATAGTGCTAATAAGCCCACTGCAGAAGAACTAGGAGTAGCTGGGGTGAATATGCCCATGGCTGATACAGATCTAAATAATCATAAGAATCCTGGTTTCTATTGGGGTTATCAAAATATGGTCAATGCCCCTGTACCCAATGGTGTAGCAATTATGGAGGTAGTTAAGTATAATAATGATTGTGTATTACAAAGATTTACCTCAGTTAGAGCAGATAGTAACCATACTACTTATATTAGAACCTGCTATTCAAATAAATGGTCTAGCTGGAAGAAGATTTATGATGAGGGTAATAAGCCTACCCCAGCAGATATAGGGGCCATACCCCAGATACCCATTAGAATAACTCAGGATCTTAACACATTCACTACACCTGGGTTATATATTGTGGATAGAGCAACTCATGCTCCACAATCATATGGAAGATTATTAGTTCTAGGTTGGGACAACGACCAGAAGTGGGTAACTCAGGTATTCTATGCTGATATTACTAATAAAGTATATGTTAGATGTAGCACTAACAACACTGCTACTGAATGGACTTCTTGGGCTGAACAGTACTCAACTAGTTTTAAACCAACTCCCCAAGACATTGGGGCTTCTCCTAGTAACCATAATCATAATAAGGTATATTACCCTATACCTAAACAGGCTATTACTGATTTTAATTCCGGTATAGCTATAACTGAGGGTCAACATCTAGTATCTTCTAGTACAGCTATACCTAATTCACCTCCTTTATATGCTCAAGATGGTAGTAGTATATATGGTATACTTCATGTATATGTTAGTGTTGGTGATTCTTATAATGGTGTGAATAACTGGATATGGCAAGACTTTCATGATACTAGGGGTAATCACTACTGGAGGTATAAAATTAATAATGCTGACTGGAGTCCTTGGAGAGCTGTATATAATTCTGTTAATAAACCAACCCCCCAGGCTATAGGGGCTGTAGCTACTGAAGGTGATGGAGTAATAAATGGAACTCTAGAACTTAGAAAAGCCGATAAGCTAATAAGGTTTGCTACTGAGAGAGGCTGGATTTTAAAACAGGGAGGAACTGCAGCAGAAACCTCCTTGGATCTAGTTTCTGAAACTGATGGAAAGGCCTTTAGGGTATTAGAACCTTCGGGAAAAAAGGGCATCTATATGTGGGTATCATCAGGGGGAACACAATTTAATGTAGATGGCAATTCTGTGTACCATCAAGGATTTAAACCTACTCCATCTGATATTGGAGCAGCCTCTTCTAGCCATAACCATGATAGTGCTTACCTGGGTAAAACTGCTACAGCTGCTAACAGTAATAAACTTAAGAACTGGGACTTAGCTGAAGGGAGTAATAACTTTGTGGGTATACCATTTATACCCCATGATGGAGTCATGGAGGTAGGTAGAATGGTTGACTTCCATGAACCTGGGACAAATAAAGACTTTAATACTAGATTAGAGTCTATTAATGGAGCTCTAAAATGCTGGCAAGATTTCTCAGCTGAAAACTTATGGGCCAGAAAATATATGAGAGTAAATGACTGGTATGGTGGATCTGAAGATGGCCGATTCTACTATAAACAAGATGGAAAAGGACTATATACTGAGAATGTGGAAAACCTCTATGTAAAAGGTAGTCCTGTGGCTAAAGGAGACTATTGGGATGTAGGGGATAATACCAGAGTAGTTAGTCTGGGGGGAGGACTAAGATTAGTTCGTCAAATAGTTAAGACAGGCTATGCTAACTCAGGTGGAGGTGTAAATTATACTATACATTTCCCTAAGGCTTGGAATTGGGTATTACCTATATCTCTAGTATCACATAACTATAATGACGCTTCTAATAATACCTCAGGTTATTGTACTATTGACTATTGGAATAACTCATATTTGAATGGTGGATGTTATCAAATGGTAGCTGGTAAGCCAACTCAAATAATACTAACCTATTTAGCTACTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd75bd729108793d1ebcd8edb24d4181db16847a706918332bbc31293b9df188
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6841
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage CP3 Infecting Clostridium perfringens Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-03-15 — GenBank