Protein

View in Explore
Genbank accession
QGZ17675.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRSIVLISLLTILILTTSIKSEEVTTNNLLDQNFDNGSWSGSADGRHGSNVIAAHNDEYITSDDISLRNDANLTQEQINDGFTTNHSFKYWHWNNFNSTVQSTVTIVGSDGETTTQIRTYDSTGCGYINCGSYNTGSDTLSISRNSQTDYNISIQYDFSDTSNSTGHYGVDLKEPSLTVTYESDPVRLDTSLENEIIELFDDFKPEDNIKFEDTKFEDNFVALPEPSFAIEEEFKMEDDFKMEEPEYEEPSFEEPIVMEMPKESKEEEPVMEMVMEFIEEDDDKEEEPQPMEITEMSEDKPKEEKTTSELLQEGFKEEQEQNEEEESDSEVTETANTEDENNKEQKEVQQKETKTVGLEEVLDKIDEKVKDIDKNLQLKNLVKLKVMSSNNLLDAYNVPFYEPKIIYEDQVKIQDNRIIYDIDLVQYKQNDPIALKNQKLYNINQERQKLLSELRVLQNEL
Physico‐chemical
properties
protein length:461 AA
molecular weight: 53267,63130 Da
isoelectric point:4,18138
aromaticity:0,07809
hydropathy:-0,87549

Domains

Domains [InterPro]
Coil
Unmapped
308–328
Coil Coil Coil
QGZ17675.1
1 461
Architecture
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17675.1 [NCBI]
Genbank nucleotide accession
MN698239.1 [NCBI]
CDS location
range 29953 -> 31338
strand +
CDS
ATGCGATCTATCGTATTAATAAGTTTGCTGACGATATTAATCCTTACAACTTCGATAAAAAGTGAAGAAGTTACAACAAATAATTTATTGGATCAAAACTTTGATAATGGATCCTGGTCTGGGTCCGCTGATGGTCGCCATGGGTCTAATGTTATTGCTGCTCATAATGATGAATATATCACTTCAGACGATATAAGTTTAAGAAATGATGCGAACCTTACACAAGAGCAAATAAACGATGGATTTACTACTAATCATAGTTTCAAGTATTGGCATTGGAATAATTTTAATTCAACTGTACAATCAACCGTAACTATTGTAGGGTCTGACGGTGAAACAACAACGCAAATACGAACTTATGATTCTACTGGCTGTGGCTATATTAACTGCGGTTCTTACAACACTGGGTCTGACACTCTTTCTATATCTAGAAATTCTCAAACCGACTATAACATCTCTATACAGTATGATTTCTCAGATACTAGCAACTCTACGGGTCATTATGGGGTCGATCTCAAAGAACCCAGCCTTACAGTTACCTATGAATCCGATCCAGTTCGATTAGACACAAGTTTAGAAAACGAAATCATAGAGCTATTTGATGACTTTAAACCTGAAGACAATATTAAATTTGAAGATACAAAATTTGAAGATAACTTTGTTGCATTACCTGAACCAAGTTTTGCAATTGAAGAAGAATTTAAGATGGAAGATGATTTTAAAATGGAAGAACCTGAATACGAAGAACCAAGTTTTGAAGAGCCTATAGTCATGGAGATGCCCAAAGAATCAAAAGAAGAGGAACCTGTGATGGAAATGGTAATGGAATTTATTGAGGAAGATGATGATAAAGAAGAAGAACCACAACCTATGGAGATAACAGAAATGTCAGAAGATAAACCTAAAGAAGAAAAAACAACATCTGAATTATTACAAGAAGGTTTTAAGGAGGAACAAGAACAAAATGAAGAAGAAGAATCTGATAGCGAAGTTACTGAGACTGCCAATACTGAGGATGAGAATAATAAAGAACAAAAAGAAGTACAACAGAAAGAAACAAAAACAGTTGGACTTGAAGAAGTATTAGATAAGATTGATGAGAAAGTTAAAGATATAGACAAAAACTTACAACTAAAAAACTTAGTGAAATTAAAAGTAATGTCTTCAAATAATCTTCTGGACGCATACAATGTTCCTTTTTATGAACCAAAAATAATATATGAAGATCAAGTAAAAATACAGGATAATCGAATTATATACGATATTGATCTTGTTCAATACAAACAAAACGATCCTATTGCCTTAAAGAACCAAAAATTATATAATATAAACCAAGAGAGACAAAAGTTATTAAGTGAATTAAGGGTATTACAAAATGAACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e4db5acaf35cf13f9b6e9b094b8e7d590a6f7d747f459b7fe79d3e1a3cb8856
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank