Protein

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Genbank accession
CAB4139230.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAYSYVRYSGNGSTTNYTFSFPTISQDHIKVRVNGSLVTNWSFLSASTIQFAVAPANAAVIEIRRETPKESAIVNFTDGSVLLERDLDLLATWQLYVAQETEDDLEDTIKTDSLGRFDANNKRIINVADPVNAQDAVTKTWAETGMSSQLAQATSQATAAAGSATAAAGSASAAATSASNASTSASNAATSASGASTSATAAAGSATAAANSATAAGTSATNANTSALAAAASATAAAGSATTATTQATNAAASAVNAANSAAAAATALDNFDDRYLGQKASDPSVDNDGNALITGALYYNTTDSAMRVYTGTGWINASSAQVATMKTYVYVATAAQTTFTGNDTNGSSLTYVAPYLIVSLNGLELRPVVDYTATSGLSVVLTSAATAGDELQIQAFAGFNVANIQSANVSFQQSGAGSTVRSIDAKLKEIVSVKDFGAVGDGVTDDTAAIQAAINQGGKICLIDNATHKVSAVLNIDISLTSLIGNGSVIDGSSSSTGVLNVYSSASYGAQRLERNWTHWIEGVSFKGTKTPGFQLVTVGHPTYLNNSEITFRNCSFRNAGRLVQFISNAWRVNFDHCGFESPEDNYLHFDSGANAAEVMRFTHCWFVDGTTAYIFLREGQWFFTHCSFIGGGTGGIQVLGSAHVVLRDCNLECQPDVANQRVLEGYNSSHIVVDGCIFGNNGSAANQAPFLIQDSCSLKVINSTLPLYGTDLRGETGGDLRRALVAGGSPYVSCQNNYVKGTGIPGRTDWAVFSHLNNILANGGGETASTTGWSPSAYGTAGSTFTSVTTAPRIGSRHFLVDCVANGGIAVTQTISGASQYIGRTAVFGMWAKAIGGSGAVDFPTIKCLNTSGVVISSFAIPVNATDTSYTWVGGFLVVPSGTDRIQFEIGGQQQAGAHQLHYDDIIVNVI
Physico‐chemical
properties
protein length:913 AA
molecular weight: 94545,21240 Da
isoelectric point:5,01845
aromaticity:0,08324
hydropathy:0,02421

Domains

Domains [InterPro]
DC_1510
STR
1–213
DC_1510 IPR012334 G3DSA:2.60.120.260
IPR005604
ATT
2–119
IPR005604 DC_2093
DC_1407
STR
418–878
DC_1407
IPR011050
STR
430–759
IPR011050
IPR024535
ENZ
431–653
IPR024535
CAB4139230.1
1 913
Architecture
ATT
STR
ATT 1-119 | STR 120-910 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4139230.1
1 913
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,9936
Central domain 164 758 596 0,6697
C-terminal 759 913 154 0,9930
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-758
C-terminal
759-913

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4139230.1 [NCBI]
Genbank nucleotide accession
LR796364 [NCBI]
CDS location
range 37063 -> 39804
strand +
CDS
GTGGCGTATTCTTACGTTCGGTATTCCGGTAACGGCTCTACCACCAACTATACCTTTTCGTTTCCTACCATTTCTCAGGACCACATCAAGGTCCGTGTGAACGGTTCTCTGGTGACCAACTGGTCGTTCCTGAGTGCCAGCACGATTCAGTTTGCTGTTGCCCCTGCCAATGCGGCTGTCATCGAGATCCGCCGTGAGACCCCTAAAGAGTCAGCCATCGTGAACTTCACCGATGGGTCCGTTCTGCTGGAGAGGGATCTCGACCTGTTGGCGACCTGGCAGTTGTATGTTGCACAGGAGACCGAGGACGATCTTGAGGACACCATCAAGACGGACTCTCTGGGTCGCTTCGATGCCAACAACAAGCGCATCATCAATGTCGCTGATCCGGTCAATGCCCAGGATGCTGTGACCAAGACCTGGGCTGAGACAGGCATGTCCTCTCAGTTGGCTCAGGCTACCTCTCAGGCGACTGCGGCTGCAGGTTCTGCTACGGCTGCTGCTGGTTCTGCCAGTGCTGCTGCCACATCTGCGAGTAACGCCAGCACTTCGGCAAGCAATGCTGCAACGTCTGCCTCAGGTGCCTCAACCTCTGCCACAGCGGCTGCAGGTTCGGCCACGGCTGCTGCAAATTCCGCAACGGCTGCAGGCACTTCGGCCACCAACGCCAACACCTCTGCCCTAGCTGCGGCAGCTAGTGCAACTGCTGCCGCTGGTTCTGCCACTACGGCGACCACCCAGGCCACCAACGCTGCTGCCTCCGCTGTCAATGCGGCCAACTCTGCGGCTGCTGCTGCTACGGCTCTGGACAACTTTGATGATCGCTATCTCGGTCAGAAGGCCAGCGACCCTAGCGTGGACAATGATGGCAACGCCCTGATTACTGGTGCCTTATATTACAACACCACTGACAGTGCCATGCGGGTTTACACAGGCACGGGCTGGATCAACGCCTCGTCTGCCCAAGTTGCCACTATGAAGACATACGTCTATGTGGCCACGGCTGCACAGACTACGTTCACAGGCAACGATACCAACGGTTCCTCGCTCACCTATGTTGCGCCCTACCTGATCGTGTCTCTGAACGGTCTGGAGTTGCGTCCTGTGGTTGACTACACGGCGACTTCTGGTCTGTCTGTGGTGCTAACTTCCGCTGCTACCGCTGGTGATGAACTCCAGATCCAGGCGTTTGCAGGCTTTAACGTAGCGAATATTCAGTCGGCCAACGTAAGTTTTCAACAAAGCGGTGCGGGTTCTACCGTTCGCAGCATTGATGCAAAATTAAAGGAAATTGTTAGTGTCAAGGACTTTGGGGCTGTGGGGGATGGTGTTACTGACGATACTGCGGCCATTCAAGCAGCCATCAATCAAGGCGGGAAAATTTGTTTGATTGACAACGCCACTCACAAAGTAAGTGCGGTTTTAAACATAGACATTTCGCTCACATCGTTGATTGGTAATGGTTCCGTAATTGATGGTTCGTCTAGTTCCACTGGCGTACTTAACGTATACTCCAGCGCGTCTTACGGCGCACAGCGTCTCGAGCGAAACTGGACACACTGGATTGAAGGTGTGTCTTTCAAAGGGACCAAGACGCCTGGCTTTCAGTTAGTTACGGTTGGGCACCCAACTTACCTTAACAACTCTGAAATCACTTTCCGCAACTGCTCGTTCCGAAACGCAGGCAGGTTGGTGCAGTTTATCAGCAACGCTTGGCGCGTAAACTTTGACCATTGCGGGTTTGAGTCTCCAGAGGACAACTATCTGCATTTCGACTCAGGCGCAAACGCTGCCGAGGTTATGCGGTTCACGCATTGCTGGTTCGTGGACGGTACTACTGCTTATATTTTCTTGAGAGAAGGGCAGTGGTTCTTTACTCACTGCTCATTCATCGGAGGAGGCACCGGAGGAATACAGGTTCTAGGTTCGGCTCATGTCGTGCTGCGTGACTGCAATCTTGAATGCCAACCAGACGTGGCAAACCAGCGAGTCCTTGAAGGATACAACTCCTCCCACATCGTTGTTGACGGGTGCATCTTTGGAAACAACGGCAGCGCCGCAAATCAAGCGCCGTTCCTAATCCAAGATTCCTGTTCGCTCAAAGTCATAAATTCGACGCTTCCCTTGTATGGTACCGACCTCCGAGGGGAAACTGGCGGAGATTTGCGCCGGGCGCTTGTTGCCGGGGGATCACCATATGTGTCCTGTCAAAACAACTATGTGAAAGGCACAGGGATACCTGGGAGAACCGATTGGGCTGTGTTCTCACACCTGAACAACATCCTCGCCAATGGTGGTGGTGAGACAGCAAGTACAACTGGCTGGTCCCCAAGCGCGTATGGAACGGCTGGTTCAACTTTCACAAGCGTAACTACAGCACCGAGAATCGGGTCTCGACATTTTCTAGTTGACTGTGTTGCTAATGGGGGGATTGCGGTCACGCAGACAATTTCCGGTGCTTCGCAATATATTGGTAGAACGGCAGTGTTTGGAATGTGGGCAAAAGCAATCGGCGGATCTGGTGCTGTCGATTTCCCAACCATCAAGTGCCTTAACACCTCTGGCGTGGTTATTTCGTCGTTCGCCATTCCCGTGAACGCGACAGACACAAGCTACACCTGGGTCGGTGGCTTCCTTGTTGTGCCTTCTGGAACCGACAGAATTCAGTTTGAAATTGGTGGCCAACAACAAGCTGGCGCACATCAACTTCACTATGACGACATTATTGTCAATGTCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79946ca80bda13ba26ad25358817d70d754374f2861a8c0be333ae27f82c40ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3429
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50