Protein

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Genbank accession
XLL20565.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTNTTDKSILTAAGKALLAQLNAEEKPLVIDKMIFANVPNRPEFPQPDDVVPNDDVVHEAAVEQRGRLSVDSVIYSTTLTSQEGPFEFNWTGAYCSEYGVLVTIDHHALTPKTVDEPGVAGNTLVRSVVLEYKDIAEITNITVDASSWQYNATPRMKKMDDDVAQAIIDQNGKDWFIEDGFLVTPQASAFNIKAGAGYVSGNRVMLEFDRNVQVPNKPSFIYVDAHREGTPTGEQVTLFDFVVTAEEKDDYTDANGVKHFVCKVAQVLADGSVSDLRPEGESASRNWVEKEIPINKFPVIGEAGRSSTQRFSDYLNIKDFGAVPGADITLALSEAINKKVRKLRITDSFVFNGDISTPKNMTLIFEDGGEISYEAGCNLIINGRVVSDSLPFKDGGGTIRVEGYDIIVGSTFDCDVKTPNEALALVPGRQWQRFNIKISKGTYDEDVLCANKWAASATIGQVIGERTGVYITSLSGNADDVHIKSWLCVSSGGGSFTPMIAEVTIDDHNTKTNETCSCEWYGCPSGAVLGVKFRSGNNSDKAILSYQSNVSVESCDFGDRLYNYLMYTKHGGVIQENSNTRLNVGTSSVGVAKKSITKPLGGPIFGSDFSQMSSDDYQRHSYGGAGVSFTYSRDERTIYGPALLADVVSAYHSYLTSISDYSNNVINGATVDSDPIYGMLIQTGTQPSAKAEAWIRRQVTISRQEINMRQQLLVGARIESLGDLGQFDVSIGHGVNQPKLSIRFNKQGVFGVYRDQDGAESLVTIMSNISQVIKTDLIIDLNVIRGDTNQEGVVQFRVRTETFSFYKQTKIFSNSYKTDFLWHVSASDNGQNTKVCVGEIRLFRE
Physico‐chemical
properties
protein length:845 AA
molecular weight: 92652,59230 Da
isoelectric point:5,00424
aromaticity:0,08876
hydropathy:-0,26947

Domains

Domains [InterPro]
DC_1549
ATT
1–273
DC_1549 DC_2185
IPR022225
ATT
8–146
IPR022225 DC_2249
XLL20565.1
1 845
Architecture
ATT
RBD
ATT 1-424 | RBD 580-845
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL20565.1
1 845
Domain Start End Length (AA) Confidence
N-terminal 1 329 329 0,9971
Central domain 330 604 276 0,8589
C-terminal 605 845 240 0,9340
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-329
Central
330-604
C-terminal
605-845

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 10N.286.54.E4_PE001
[NCBI] 		3385330 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL20565.1 [NCBI]
Genbank nucleotide accession
PQ189350.1 [NCBI]
CDS location
range 5025 -> 7562
strand -
CDS
ATGACAAACACCACTGATAAGTCGATTTTGACCGCCGCAGGTAAGGCGTTATTGGCTCAGCTTAATGCAGAAGAAAAGCCGCTTGTAATCGACAAGATGATTTTTGCTAACGTACCGAACCGCCCCGAGTTCCCTCAGCCTGATGATGTGGTACCAAATGATGATGTGGTTCATGAAGCTGCGGTAGAGCAACGCGGTCGCCTTTCGGTTGATTCGGTTATTTACAGCACAACGCTCACCAGTCAAGAAGGCCCGTTCGAATTTAACTGGACAGGTGCTTACTGTTCAGAATATGGCGTGTTGGTCACCATTGACCACCACGCGCTAACACCTAAGACGGTAGACGAACCAGGTGTTGCAGGTAATACCTTGGTGCGTTCTGTCGTACTTGAGTACAAAGACATTGCTGAAATTACCAACATCACGGTAGACGCATCATCGTGGCAGTACAACGCAACGCCACGTATGAAGAAAATGGACGACGATGTGGCCCAAGCCATTATCGACCAGAACGGCAAAGATTGGTTTATCGAAGACGGTTTCTTGGTCACGCCTCAAGCGAGCGCATTCAACATCAAAGCGGGTGCCGGCTATGTGTCGGGCAATCGTGTCATGCTCGAATTTGATCGTAATGTTCAAGTTCCTAACAAGCCATCATTCATCTATGTTGACGCACACCGCGAAGGAACGCCAACAGGTGAGCAAGTCACCTTGTTTGATTTTGTGGTTACTGCAGAAGAGAAAGACGACTACACCGATGCAAATGGAGTAAAACACTTTGTTTGCAAGGTTGCTCAAGTGTTGGCTGATGGTTCGGTGAGTGATTTAAGACCAGAGGGAGAGAGCGCTAGCCGAAATTGGGTAGAAAAAGAAATACCAATTAATAAATTTCCAGTTATTGGGGAGGCAGGACGTTCGTCAACACAACGATTTTCTGATTATTTGAATATTAAAGATTTTGGTGCAGTGCCAGGGGCGGACATTACATTAGCACTATCAGAAGCTATTAATAAAAAAGTAAGAAAATTGCGAATCACAGACTCGTTTGTATTTAATGGTGACATTTCCACTCCTAAAAATATGACCCTGATATTTGAGGATGGTGGAGAAATCAGTTATGAAGCTGGATGTAATTTAATTATAAACGGTCGGGTGGTTTCTGATTCTCTACCATTTAAGGATGGAGGAGGAACCATCAGAGTTGAAGGTTATGACATCATTGTTGGTTCGACTTTTGATTGTGATGTAAAAACGCCGAATGAAGCGTTAGCCTTAGTGCCAGGTAGACAATGGCAGAGATTTAATATCAAGATATCTAAGGGTACTTATGACGAAGATGTTCTTTGCGCAAATAAATGGGCAGCGAGTGCGACTATAGGTCAAGTTATTGGTGAGCGGACAGGTGTTTATATTACGTCACTCTCAGGCAATGCTGATGATGTACATATTAAATCGTGGTTATGTGTATCGTCAGGCGGTGGTAGTTTTACGCCAATGATTGCGGAAGTTACGATTGACGATCATAACACTAAGACAAATGAAACATGCTCATGTGAGTGGTACGGTTGTCCGTCAGGTGCTGTACTTGGGGTTAAGTTCCGCAGTGGAAATAATTCAGATAAAGCAATCTTGTCATATCAATCTAATGTATCTGTAGAATCGTGTGATTTCGGTGATAGGCTATATAACTATTTGATGTACACCAAACACGGTGGGGTAATTCAAGAAAACTCAAACACTCGCTTAAATGTCGGCACATCAAGTGTTGGTGTGGCGAAAAAATCCATTACAAAACCGTTAGGTGGTCCAATTTTTGGGTCTGACTTTTCACAGATGAGTAGTGATGATTATCAGCGCCATTCTTATGGTGGCGCAGGTGTCTCATTCACATATAGTCGTGATGAACGTACTATTTATGGTCCCGCATTGCTTGCCGATGTTGTTAGTGCATACCATTCTTATTTGACTTCTATTTCTGATTACTCCAATAACGTAATCAATGGAGCAACAGTGGATTCAGATCCCATTTATGGGATGTTGATTCAAACTGGAACACAGCCGTCGGCGAAGGCTGAAGCATGGATACGCCGACAGGTGACGATCTCTCGACAAGAAATCAATATGCGGCAGCAATTGTTAGTTGGAGCCAGAATAGAATCATTGGGTGATTTAGGGCAGTTTGACGTTTCCATTGGTCATGGGGTTAATCAACCTAAATTATCCATTCGCTTTAATAAGCAAGGTGTTTTTGGTGTTTATCGAGATCAAGATGGCGCAGAATCTCTGGTAACGATAATGTCAAATATTAGTCAGGTAATAAAAACAGATCTCATTATTGACCTGAATGTGATTAGAGGTGATACAAACCAGGAGGGTGTTGTTCAATTCAGGGTAAGAACAGAAACATTTAGTTTTTATAAGCAGACTAAAATATTTAGCAACTCATATAAGACTGATTTTTTATGGCATGTTTCAGCCTCAGATAATGGACAAAATACAAAAGTCTGTGTTGGGGAGATAAGATTATTTAGAGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
834caaa9f32f328a4a52c8f8329c98d42c83863bfed872dddb79ac8d5558129b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50