Protein

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Genbank accession
XGD05842.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MTITNKDYDTWESKMYGLPYAVYSYYIDSTVAGENTAVIGASGDNVFSVVYTPFLDIADLELEEIPYDNKRFGNISEIRPEIKANPHVFRIKKLLKGSKFVGEFETYKVKKSVGGKRNWRNESKLYNYPYTYLMLSDGINDPMILKPQFCSIPSCSVGIKLSVSDRCSYGIFIQTYKGDTDGMTEALVSNDALEMPCTSSAYANWVATSKNQTAQSIQNTVNQTILNNKIAKNNMNLGIANSVVGGVASAFTGNVGGVIDSVFGGVGSYMDKKHTNMQSQLTRESAISTALATANDMRSTPNTLLSQGSNIIYGLRNGGQELRLYRYGLTERYYEKIGDYFAQFGYKQNKMMKININSRYYYNYIKTIGINIKTNKIPNNYLNILKGIFDNGTTIWHIDNDGVEIGNYSMDNREV
Physico‐chemical
properties
protein length:415 AA
molecular weight: 46488,01760 Da
isoelectric point:8,54420
aromaticity:0,11325
hydropathy:-0,38386

Domains

Domains [InterPro]
DC_0687
ATT
1–103
DC_0687 IPR048710
IPR048710
STR
120–412
IPR048710
XGD05842.1
1 415
Architecture
ATT
STR
ATT 1-103 | STR 104-413 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGD05842.1
1 415
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1259
Central domain 11 204 195 0,8107
C-terminal 205 415 210 0,4148
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-204
C-terminal
205-415

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CpP_VarHS
[NCBI] 		3455035 No lineage information
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGD05842.1 [NCBI]
Genbank nucleotide accession
PP973485 [NCBI]
CDS location
range 9603 -> 10850
strand +
CDS
ATGACAATAACTAATAAAGATTATGATACGTGGGAATCCAAAATGTACGGGTTACCATATGCCGTATATAGCTATTATATTGACTCTACCGTGGCAGGTGAAAACACGGCAGTTATAGGTGCAAGTGGTGATAATGTTTTTAGTGTTGTTTACACACCTTTTTTAGATATTGCTGATTTAGAACTAGAAGAAATCCCATATGACAATAAAAGATTTGGTAATATTTCAGAAATTAGACCCGAAATAAAAGCAAATCCTCACGTTTTCAGAATTAAAAAATTATTAAAAGGTTCTAAATTTGTAGGTGAGTTTGAAACTTACAAAGTAAAAAAGAGTGTGGGTGGTAAAAGAAACTGGAGAAATGAAAGTAAGTTATATAATTATCCATACACTTATTTAATGCTAAGTGATGGTATAAATGACCCTATGATTTTAAAGCCTCAATTTTGTTCAATTCCTAGTTGTTCAGTTGGTATAAAATTATCCGTTTCAGACAGGTGTTCCTATGGAATATTTATTCAAACATATAAAGGTGATACAGATGGAATGACGGAGGCTTTAGTGTCAAATGATGCACTTGAAATGCCTTGCACTAGTTCAGCATATGCAAATTGGGTTGCAACTTCAAAAAATCAGACAGCACAATCAATTCAAAATACTGTAAATCAAACAATTTTAAATAATAAAATAGCAAAAAATAACATGAATTTAGGTATTGCAAATAGTGTTGTTGGTGGTGTTGCTAGTGCGTTTACAGGTAATGTTGGTGGTGTAATAGATAGTGTCTTTGGTGGTGTTGGCTCATATATGGATAAAAAACATACAAATATGCAGAGTCAATTAACTAGAGAATCAGCTATCAGTACAGCTTTAGCTACAGCAAACGACATGAGGTCAACGCCTAATACTTTATTAAGTCAAGGGTCAAATATAATTTATGGGTTGCGTAATGGTGGTCAAGAGTTAAGACTTTACCGTTATGGTTTAACAGAAAGATACTATGAAAAGATTGGCGATTATTTTGCCCAATTTGGATATAAGCAAAATAAAATGATGAAAATTAATATTAATTCAAGATATTATTATAACTATATAAAAACAATAGGAATTAATATAAAAACTAATAAAATTCCTAATAATTACTTAAATATCCTCAAGGGTATTTTTGACAATGGTACTACAATATGGCATATTGATAATGACGGTGTCGAAATTGGTAATTATTCTATGGATAACAGGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e4c1f34b18a59927a339eb357fd6fa081dfab435b8f5821538838fb4c4cd30d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50