Protein

View in Explore
Genbank accession
YAA52907.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,83
Protein sequence
MNAHTPFDANQDWSNPYCQNRSNDPMVDALLGNAYHVVRTVYCNLGNLKLLYDFLNQYGMVIGVQSEAELKALTSDAKYARIYGFSRTGDRQVTDYLYVDGDRTGIIPDDPEATGSWITVATSGSNGGGGGTSSGGGAYIPWVYANGSATGGETTINVPDDTLGVPFIIVNGDMQYVGRGFEFNVENQSVTLAQPLEEGDEVVFLLTGTPAVPDNPNVSDWIQINWLYNGGYASGGEQVIAIPYTFESVPAIYKNGERYYAGLADKSYTVDAANQRIFLTEPLATNDRLIVTIGGESTTLVMSDRTIQEVARSANVHEDDVILSTNTTQYLNGKRVIYDVVEHKIYGLPTLPANVYINTVSNGQLTYSPGSITVDLLPVSNEYTDALRSELAAETGSELVTYKTALSGAIARSIHERLSDYVSVLDFGAKGDGITDDTQAFAAAASASPQGAYVPSGTYLLPEDINGRFYGQGKRIKAVGDSGIPFTNVAQSHNNLILGYDAAKDYTDAGKGDQLVLLGPSSGRNLTTGTNSIVVGVGGLSGDTLEDALTDTSPFTGTEVISIGINALKKTTTGNNMIGIGRDALNECKDGRFNVAIGMSALQQLHSGEANVAIGRSAGMRTGIYTNEEGVRLGYTTCSGNTLIGNAAGRELKSGNHNTAVGNGALRGVSSESNSFTGTMEGSFNTAVGVDTLTSFTSGELNTIVGARAGRKLPSGSGNIFIGADAGAGIDSEKSNTLIINNHTGLPFIEGTMGGAQSENNYLRIDGSVAPQIDNTRTCGQSSRRWQTVFATNGVIQTSDGRCKDVYEITKAEYHAGLELSSSMIKFKWTDTEADKYHFGCLAQEVMLIMEKHGLNTLDYSLVTYDAEADMYGVNYAELSCFCIAALSQRVLGSA
Physico‐chemical
properties
protein length:895 AA
molecular weight: 95147,32700 Da
isoelectric point:4,64121
aromaticity:0,08156
hydropathy:-0,20358

Domains

Domains [InterPro]
DC_0265
STR
1–868
DC_0265
G3DSA:3.30.2020.50
ATT
295–382
G3DSA:3.30.2020.50 IPR012334 IPR036388
IPR011050
STR
417–483
IPR011050 IPR030392
IPR011050
STR
419–735
IPR011050
IPR024535
ENZ
421–517
IPR024535
YAA52907.1
1 895
Architecture
STR
ATT
STR
RBD
CHP
STR 1-294 | ATT 295-382 | STR 383-868 | RBD 869-883 | CHP 884-895
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAA52907.1
1 895
Domain Start End Length (AA) Confidence
N-terminal 1 437 437 0,9662
Central domain 438 739 303 0,9841
C-terminal 740 895 155 0,9600
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-437
Central
438-739
C-terminal
740-895

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 10GB
[NCBI] 		3446674 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA52907.1 [NCBI]
Genbank nucleotide accession
PV805630.1 [NCBI]
CDS location
range 63315 -> 66002
strand -
CDS
ATGAACGCACATACCCCCTTCGATGCAAATCAGGATTGGTCCAATCCTTACTGCCAGAATAGATCCAACGACCCAATGGTAGATGCACTACTTGGTAATGCTTACCACGTAGTCCGAACTGTGTATTGTAATTTGGGTAACCTGAAACTCCTGTATGATTTTCTGAATCAATATGGAATGGTTATTGGCGTACAATCTGAGGCTGAGCTTAAGGCTCTTACTTCAGATGCTAAGTACGCCCGTATCTACGGATTCTCCCGTACAGGAGACCGTCAGGTTACTGACTATTTGTACGTAGATGGTGATCGTACCGGCATCATTCCGGATGATCCAGAAGCAACTGGTTCATGGATTACTGTTGCTACTTCTGGTTCTAATGGTGGTGGTGGTGGTACTTCCTCTGGCGGGGGTGCTTATATTCCCTGGGTATATGCAAACGGTTCCGCTACTGGTGGGGAAACCACAATCAACGTACCGGATGATACGTTAGGCGTACCTTTCATTATTGTTAATGGTGACATGCAGTATGTAGGCCGTGGCTTTGAATTTAATGTAGAGAATCAGTCCGTGACTCTGGCTCAGCCTCTGGAAGAAGGTGATGAAGTAGTATTTCTTCTAACTGGAACTCCTGCTGTACCGGATAACCCTAACGTTAGCGACTGGATTCAGATTAACTGGCTATACAACGGTGGGTATGCTTCGGGTGGTGAGCAAGTAATTGCTATTCCGTATACGTTTGAATCTGTGCCAGCCATCTACAAGAATGGCGAACGCTACTATGCAGGTTTGGCTGATAAATCCTATACAGTCGATGCAGCTAACCAGCGTATCTTTTTAACAGAGCCTCTGGCTACCAACGATCGTTTGATTGTAACTATTGGCGGTGAGTCTACTACCCTGGTTATGTCTGACCGTACCATTCAGGAAGTAGCACGTTCAGCTAATGTGCATGAGGATGATGTTATTTTGAGTACTAATACTACTCAGTATCTGAATGGGAAGAGGGTTATTTATGATGTAGTTGAGCATAAGATTTATGGTCTTCCTACTCTTCCTGCTAATGTTTATATCAACACTGTTTCCAATGGGCAGTTAACTTATTCCCCAGGTAGCATTACAGTTGATTTGCTGCCTGTATCAAATGAATACACTGATGCGTTACGCTCGGAACTAGCTGCAGAAACTGGTTCAGAATTAGTTACCTATAAAACTGCATTAAGCGGTGCTATTGCACGTAGTATCCATGAACGGCTTTCTGATTATGTAAGCGTCCTTGATTTTGGTGCTAAAGGTGATGGTATTACAGACGACACACAAGCCTTTGCTGCTGCCGCATCTGCTTCACCTCAAGGTGCTTATGTTCCGTCAGGCACGTATTTATTACCAGAAGATATTAATGGCAGATTCTATGGTCAGGGTAAGCGTATCAAGGCTGTAGGCGATAGTGGTATTCCTTTCACTAACGTAGCCCAATCCCATAACAACCTCATCTTAGGTTATGATGCTGCAAAAGATTACACGGACGCAGGAAAAGGCGACCAATTAGTATTACTTGGCCCAAGCTCAGGTCGCAACCTTACCACAGGTACTAACTCTATCGTAGTTGGTGTGGGTGGTTTATCGGGTGATACCCTAGAAGATGCACTGACAGACACGTCTCCTTTCACTGGTACAGAGGTTATTAGCATCGGTATCAATGCTCTTAAGAAAACTACCACTGGCAACAACATGATTGGTATCGGTCGTGATGCCCTGAATGAGTGTAAGGATGGACGATTCAACGTAGCTATAGGTATGTCTGCTTTGCAACAGCTACATTCTGGTGAGGCTAATGTAGCAATAGGTCGTTCGGCAGGTATGCGTACTGGCATCTACACTAATGAAGAGGGTGTACGCTTAGGTTATACAACATGTAGCGGTAATACGTTAATAGGTAACGCGGCTGGTCGTGAATTGAAGTCAGGCAACCATAATACAGCCGTAGGTAATGGTGCTTTACGCGGTGTAAGCTCAGAGAGTAACAGTTTTACTGGTACGATGGAAGGTAGCTTTAACACGGCTGTTGGTGTTGACACCTTAACCTCTTTTACCTCTGGTGAGTTGAATACTATTGTTGGAGCAAGGGCAGGACGTAAGTTACCTAGCGGATCTGGTAACATCTTCATTGGTGCGGATGCAGGTGCAGGTATTGATAGTGAGAAGTCTAATACGCTAATTATTAACAATCACACTGGCTTGCCTTTCATAGAAGGTACTATGGGTGGTGCTCAGAGTGAGAATAACTATCTCCGTATAGATGGGAGTGTAGCACCTCAGATTGATAACACAAGAACCTGTGGTCAATCTAGCCGTAGATGGCAGACAGTCTTTGCTACAAATGGTGTTATTCAGACGTCTGATGGGCGATGCAAGGATGTATACGAGATTACCAAGGCTGAATACCATGCTGGCCTAGAGTTGTCCTCTAGCATGATTAAGTTCAAGTGGACAGATACGGAAGCAGACAAGTATCACTTCGGTTGTCTGGCGCAAGAAGTCATGCTAATTATGGAGAAACATGGGTTAAATACTCTGGATTACTCTCTCGTTACCTATGATGCTGAAGCAGATATGTATGGTGTTAACTATGCAGAACTGTCTTGCTTCTGTATCGCAGCATTATCCCAACGTGTATTAGGCAGTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6dfaad84ed789242f9ab5b864d898361dad1108f859171872f0ac8548676aa09
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50