Protein

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Genbank accession
XEN39323.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAENELYGHDGRGHFKGVSLVEVPQNKSLIFTDILTTDSALNPSKLSSSQEYGRGFLIQASKEGALSHLGITPEMLTPGTQGPAGPKGDPGPQGLQGIQGPKGDPGADGEPGPQGLQGPAGPQGPIGPGGEGSIGPKGDKGDPGPQGLQGIQGPAGEPGIQGPIGPIGPAGLVWRGQWNSIENYEADMAVGYQGASYFAVRANTGVSPLTSAADWALLASMGATGPQGPVGQTGPQGPQGIQGPQGLDGAGIVWRGQWFNGQVYNKNDCVYDLGSSYICSGGGHIASEQNRPTSETSIFWDYVAKKGEEGLQGIQGPTGQRGATGPAGPKGDTGIAGPQGVQGERGIQGIQGPAGPTGSQGPVGPKGDKGEDAVFDVESLTQSQLQTLYNKLLAFHPTRYWRDSVKFPFPYDTTVEKILPLWAFNFKLHFKMISYYSFEIRVSNQGGSGRYDIKKMTEYDGAGLECLSFVDKLFASNPEVFDAVSFTQSREFNRYEIFDRATRKWYTLSLYAVGSLHPSSTEEVEIFVSIEDKTAGGKF
Physico‐chemical
properties
protein length:539 AA
molecular weight: 56748,32330 Da
isoelectric point:5,07756
aromaticity:0,09276
hydropathy:-0,47699

Domains

Domains [InterPro]
DC_0518
ATT
2–70
DC_0518 IPR008160 DC_1060 DC_1819
IPR008160
STR
78–130
IPR008160 G3DSA:2.10.10.90 IPR008160 DC_0588
IPR050149
Unmapped
78–370
IPR050149
XEN39323.1
1 539
Architecture
ATT
STR
RBD
ATT 2-70 | STR 71-390 | RBD 391-539
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BP13076
[NCBI] 		3241510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39323.1 [NCBI]
Genbank nucleotide accession
PQ118624.1 [NCBI]
CDS location
range 42206 -> 43825
strand +
CDS
ATGGCAGAAAACGAATTGTACGGTCATGATGGAAGAGGTCATTTCAAAGGAGTATCTTTAGTAGAAGTTCCTCAAAATAAATCTTTAATTTTCACGGATATTTTGACAACTGACAGTGCTTTAAATCCTTCCAAACTGTCCAGCTCACAAGAGTATGGTCGAGGATTTTTAATTCAAGCATCAAAAGAAGGAGCTTTATCTCATCTTGGTATAACTCCTGAAATGCTGACGCCTGGAACTCAAGGCCCAGCTGGTCCTAAAGGAGACCCGGGTCCTCAAGGACTTCAAGGTATTCAAGGACCTAAAGGAGACCCAGGAGCTGATGGAGAACCAGGCCCTCAAGGACTTCAAGGACCAGCAGGCCCGCAGGGACCTATTGGCCCAGGAGGAGAAGGAAGTATAGGTCCAAAAGGTGATAAAGGAGACCCAGGTCCTCAAGGACTTCAGGGTATTCAAGGTCCCGCCGGTGAACCTGGTATTCAAGGACCTATTGGCCCTATTGGCCCGGCAGGATTGGTATGGAGAGGACAATGGAACTCAATAGAAAATTATGAAGCTGATATGGCAGTAGGTTACCAAGGAGCTTCATATTTCGCTGTACGAGCCAATACGGGTGTTTCTCCACTGACTTCAGCCGCTGATTGGGCTTTACTTGCTTCAATGGGAGCTACAGGCCCTCAAGGACCCGTAGGTCAAACTGGCCCACAGGGCCCACAGGGAATTCAAGGTCCGCAGGGATTAGATGGCGCTGGGATTGTCTGGAGAGGACAATGGTTTAATGGACAAGTGTATAATAAAAATGACTGCGTGTATGATTTAGGTTCTTCTTATATATGTTCTGGTGGAGGGCACATAGCATCAGAACAAAATAGACCTACTTCTGAAACAAGCATTTTCTGGGATTATGTCGCCAAGAAAGGAGAAGAAGGGCTACAGGGAATTCAAGGACCCACCGGGCAAAGAGGAGCAACAGGACCGGCTGGACCTAAGGGAGATACTGGTATTGCCGGGCCACAAGGTGTTCAAGGAGAGCGAGGCATTCAGGGAATTCAAGGTCCCGCAGGGCCCACAGGATCTCAAGGCCCAGTCGGTCCCAAAGGAGATAAAGGAGAAGATGCAGTTTTTGATGTCGAATCATTAACTCAGTCTCAGTTGCAGACCTTATATAATAAATTATTAGCATTTCATCCAACCCGTTATTGGAGAGATTCTGTTAAATTCCCGTTCCCATACGATACTACTGTTGAGAAAATATTACCTCTTTGGGCATTTAACTTTAAACTTCATTTTAAAATGATCAGCTATTATAGCTTTGAAATACGAGTTTCTAACCAAGGCGGGTCTGGTCGTTACGATATCAAGAAAATGACCGAATACGATGGCGCCGGGCTTGAGTGCTTATCATTCGTAGATAAACTTTTCGCGTCAAATCCGGAAGTGTTTGACGCAGTATCATTTACACAAAGCCGAGAATTTAACCGTTATGAAATATTTGATAGAGCAACACGTAAATGGTATACTCTTTCTTTATATGCAGTCGGAAGTTTGCATCCATCAAGTACAGAAGAGGTTGAGATATTTGTATCTATTGAAGATAAAACTGCTGGCGGCAAGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a587038d1cd0f86bc98af2d9e713174b8175d29a6b66ad7149ab978d12f10e6f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50