Protein

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Genbank accession
AYP68602.1 [GenBank]
Protein name
carbohydrate binding domain protein
RBP type
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MPVVATGQLTLTDLNDAIIGGSAPTNPIVDTLWIDSSTSPPKLKKWSGSAWVIQNLSIADLDPNKDQIITDSQQALSNLSNDARITQAERKEVKEAMMKITGVIIANTSNAPTTATMDSSAKGDFYSARKKALNAGLASNHADYVDIATKYNTLVAYLNALSPKPWDTASTAVITVVADTWRNHWLNYYTAYNKLEETVATKLKDNVDSIVVGGRNLLRDSNHLTLTPGMQAVWQAWGGNTATVSYTTDTPTEFSTGNSIRIQVTTKGTGGSYVDLDTFTLQAGKTYTMSFYAKSQSGTIAHQAHLASLNRISDNIYITSGTSFIVPTAWTRFSYQFTVTTSTAGVYRRRHIVYDVDTIWLSHVQLEEGNKVTDWKPSPDDTPNLAPGAGRNLLRNTDFAEIEEVSYGWDKNLNGTQGPTRWSLYNSGVPVPATGWHANLYTDFGYPVIRFNDRNSTITGAGTHRWMAATQNLRLDEDFCTSIQAGKTYVLSMEVRADTLNMRLNVGFHHYTYSGGTTRGFYGYQWFLNPSMSTNIWEKKYVTFTIDNAWDITKDALMYVYGHNSSPEGTMYVKNIMLEEGVFPSAWRVSGMDNNFRITTLENDLTDIKEITKPDGLYTQIKQSQNYINEVEGYALASDLEGLATSDGVKSEIEEAIKPYKEFLEDLDTSPYVKQAEYEQTVERFQSRFTSGGGANLLQNSVGFNDFNFWSRTSNNMVPNSGMFENTSGFTLAAGWTRDTTDTFYGIPSGKCVVSGLSADAWRGWFTPYFPATPGRVFTGSFWVMFKSGANIDRSVAMELEWFNGTTRISTASLVIPVNMDGKWRRFTVTGTTPTNTTQFRLRIHCTRNGTFWASAPQVEESPTVSPYGLEMSETTWRGYTRQNDTLQTIGTGSSMMVQTGGRFVQTVTLPPLTETDAQNKIILIPFTFSVMTKLWNGGQGYIRVYDGSSMSNNYQEAQIVDGEYKKHGITVIPSSGTITVEIGAHEGEVEFTGAMLNVGDVAYQWQQNTRESHNATIRQDITGIKVFKNNADGTIESMTAMTPDKFAGYYDTNQDGIIDTNKDSVDEVFRMDKDEFLMKKAVVKDEITMGNIKIVNTPTGWAIVGLD
Physico‐chemical
properties
protein length:1108 AA
molecular weight: 123009,85490 Da
isoelectric point:5,26383
aromaticity:0,10740
hydropathy:-0,38601

Domains

Domains [InterPro]
DC_0015
STR
1–429
DC_0015 DC_1862
Coil
Unmapped
76–96
Coil G3DSA:2.60.120.260 DC_1278 G3DSA:2.60.120.260
IPR008979
STR
232–343
IPR008979 G3DSA:2.60.120.260
IPR003305
CBM
233–344
IPR003305
AYP68602.1
1 1108
Architecture
STR
STR 1-1071 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYP68602.1
1 1108
Domain Start End Length (AA) Confidence
N-terminal 1 512 512 0,4592
Central domain 513 734 223 0,3102
C-terminal 735 1108 373 0,1570
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-512
Central
513-734
C-terminal
735-1108

Taxonomy

  Name Taxonomy ID Lineage
Phage Exiguobacterium phage vB_EalM-132
[NCBI] 		2419623 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Exiguobacterium alkaliphilum
[NCBI] 		1428684 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP68602.1 [NCBI]
Genbank nucleotide accession
MH884511 [NCBI]
CDS location
range 75912 -> 79238
strand +
CDS
ATGCCAGTAGTAGCAACAGGACAGCTTACACTAACTGACTTAAATGATGCTATTATAGGAGGGTCAGCACCTACTAACCCTATAGTAGATACATTATGGATTGATAGTTCAACTTCACCACCTAAATTAAAGAAGTGGTCAGGTTCAGCATGGGTAATACAGAATTTATCAATTGCTGATTTAGACCCTAACAAAGACCAAATTATTACAGATAGTCAACAAGCTCTATCTAACTTGTCTAATGATGCTCGTATCACACAGGCAGAACGTAAAGAAGTTAAAGAAGCTATGATGAAAATCACGGGTGTTATTATTGCTAACACTTCTAACGCCCCTACTACAGCTACTATGGACTCCTCTGCAAAAGGTGATTTCTATAGTGCTCGTAAAAAGGCTTTAAACGCAGGTTTGGCAAGTAACCATGCAGATTATGTAGATATAGCTACTAAATATAACACTTTAGTCGCTTATTTAAATGCGCTTTCTCCTAAGCCTTGGGACACGGCTAGTACAGCAGTTATCACAGTCGTGGCAGATACATGGAGAAACCATTGGTTAAACTATTATACTGCGTATAATAAATTAGAAGAAACAGTAGCCACCAAGTTAAAAGATAATGTAGACAGTATTGTAGTCGGTGGTAGAAACCTTTTAAGAGATAGTAACCACTTAACTCTAACTCCTGGTATGCAAGCTGTATGGCAAGCATGGGGTGGAAATACCGCAACAGTATCATACACTACAGATACTCCTACTGAATTTTCTACAGGTAATAGTATTAGAATTCAAGTTACTACAAAAGGTACCGGAGGTTCTTATGTAGATTTAGATACATTTACTCTACAAGCGGGAAAAACGTATACTATGAGTTTCTATGCAAAATCTCAGAGTGGTACAATCGCTCACCAAGCACACTTAGCCTCTCTTAACCGTATTTCAGATAACATATATATAACTAGCGGTACAAGCTTCATAGTACCAACTGCATGGACTCGATTTAGCTACCAGTTTACTGTCACGACGTCAACAGCAGGAGTATACCGACGCAGACACATAGTGTATGATGTAGATACGATTTGGTTGTCTCATGTCCAGTTAGAAGAAGGTAATAAAGTTACAGACTGGAAACCGTCTCCAGACGATACACCTAACTTAGCCCCTGGGGCAGGTAGAAACCTCTTACGAAACACAGACTTTGCAGAAATTGAGGAAGTCAGCTACGGTTGGGATAAGAATCTTAATGGTACACAGGGACCAACTAGATGGAGTTTGTATAATAGTGGAGTACCCGTTCCTGCTACGGGGTGGCATGCAAACTTATATACGGATTTTGGATACCCAGTTATACGTTTTAATGACCGCAACTCGACTATCACTGGGGCAGGTACCCACCGATGGATGGCGGCTACTCAGAATCTTAGACTGGATGAAGATTTTTGTACCTCTATTCAGGCAGGTAAGACATATGTACTTAGTATGGAAGTTCGTGCAGATACTTTGAACATGAGGTTAAATGTTGGTTTCCACCACTACACTTATAGTGGAGGTACTACTAGAGGATTCTATGGATACCAGTGGTTCCTAAATCCTTCTATGAGCACAAATATCTGGGAGAAAAAATATGTCACCTTTACTATCGACAATGCTTGGGATATTACCAAAGATGCTTTAATGTACGTCTATGGGCATAACAGTTCTCCAGAAGGTACTATGTACGTGAAGAACATTATGCTTGAAGAAGGGGTATTCCCTTCTGCATGGAGAGTATCTGGTATGGATAACAACTTCCGCATTACTACTCTAGAAAATGACTTAACTGATATAAAAGAGATTACTAAACCTGATGGTTTATACACTCAGATTAAGCAATCTCAGAACTATATCAACGAGGTTGAGGGCTATGCACTAGCTAGTGACTTGGAAGGTTTAGCTACTTCTGATGGAGTTAAGTCAGAAATTGAAGAAGCGATTAAACCATATAAAGAGTTCTTAGAAGATTTAGACACTTCTCCTTACGTCAAGCAGGCGGAATACGAACAGACTGTAGAGAGGTTTCAATCTAGGTTCACTTCAGGCGGGGGAGCAAACTTACTACAAAACTCTGTAGGATTTAATGATTTTAACTTCTGGTCTAGAACAAGTAATAACATGGTACCTAACTCTGGAATGTTTGAAAACACTTCAGGGTTTACCCTAGCCGCAGGATGGACAAGAGATACTACAGACACTTTCTACGGTATTCCATCCGGCAAGTGTGTAGTATCAGGTTTATCGGCTGATGCGTGGCGAGGATGGTTTACTCCATATTTCCCTGCTACTCCAGGTAGGGTATTTACTGGCAGTTTTTGGGTCATGTTTAAGAGTGGTGCTAATATAGATCGTAGTGTTGCTATGGAATTAGAGTGGTTTAATGGTACTACTAGAATCAGTACGGCGTCACTCGTAATTCCAGTTAACATGGACGGTAAGTGGAGAAGATTTACTGTGACAGGGACTACTCCTACTAACACTACGCAATTTAGATTACGTATACATTGTACAAGAAATGGTACCTTCTGGGCATCAGCACCTCAAGTGGAAGAAAGCCCAACGGTTAGTCCCTATGGGCTTGAAATGTCTGAAACTACTTGGAGAGGATACACCCGCCAGAATGACACCTTACAGACTATCGGTACAGGTAGCTCTATGATGGTGCAGACAGGGGGAAGATTCGTCCAAACGGTTACCCTACCTCCCCTAACAGAAACAGACGCACAGAATAAAATTATCCTAATTCCATTTACTTTTAGTGTAATGACTAAGTTGTGGAATGGTGGTCAGGGTTATATTAGAGTTTATGATGGAAGCTCTATGAGTAACAACTACCAAGAAGCTCAGATTGTTGATGGAGAGTATAAAAAACATGGCATAACAGTTATACCAAGTTCAGGTACTATTACTGTAGAAATTGGTGCACATGAAGGAGAAGTTGAGTTTACAGGGGCTATGCTAAATGTTGGAGACGTAGCTTATCAGTGGCAACAAAATACTAGAGAGTCTCACAACGCTACTATCCGACAAGATATTACTGGTATTAAGGTCTTTAAGAATAATGCTGATGGCACTATTGAAAGTATGACTGCCATGACTCCTGACAAGTTCGCAGGATACTATGATACTAACCAAGATGGTATTATAGATACTAACAAAGACTCTGTAGATGAAGTATTCCGTATGGATAAGGATGAGTTTCTTATGAAAAAAGCCGTAGTAAAAGATGAGATAACTATGGGTAACATTAAAATCGTCAACACACCTACAGGTTGGGCTATAGTAGGTCTTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2e17714efded1170a6f970cc8788fca880936fbbaa59e7cb52f92e378156090
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2939
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative Genomic Analysis of Eight Novel Haloalkaliphilic Bacteriophages from Lake Elmenteita, Kenya Akhwale,J.K. — — GenBank