Protein

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Genbank accession
AXH71551.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,76
Protein sequence
MGSVVSQSIPNFLNGMSQQTPTQRGINQGEDQINLQNGLVDGLSKRPPLDYVATVDNTNIYSNKTKFWQIQRDADNQYIVALYNGGVKVFGLDGTEKTVTVASGSGYLTSTNPRENFKLVNIADYTFVANTGTTVVADSTTSAAKVEEFLIVCKLTNYGREYKVALKHPSMAQELEVVFQLPSGNDASTDSKFRDTNKITDILLYGTSSTHWDSAANGIGFNVRRTDTNASVSTTQGLANYSGFTSYFTFEAYDSVIYGKPTDQNANYEITTSDGSGNTAMYSIRDEIQDFSKLPFYGKEGVIIKITGEEGDTLSDYYVKFSGKSGVWNETIAPATSIGLNNSTMPHALINNNNGTFTFQELDWTDRVCGDADTNPDPTFVGKKINNLTYYKNRLGILSGENLVLTENASFFNYFATTSTQVLDTDPIDIAASGTQVNTLKNSVGFNESLLLFSDTAQYKLDSSGETISPTSAILNQVSSFEHDDKVTPVSAGKFAYFAQARTNNTAIREYFADDDTLTNDGLDISVSVQNLIPSNCYQIISNTTEDTLIFLTSDTADTQTAPYSGTVSTTYANTMYIYKYFFDGGEKVQNAWSKWTFEGVKIIGAMSLESFIYVLASEGTTTKLLKIDLRNLKDTTIGHGVYIDLKTSVTGTYDSATDLTTFVSPYGVKTGLIAVDRTNGNNYVVTNTSGSTYTIAGNHTALFIGIPYESKYTMSTQYVRENTGRGLVAVTSGRYQIRNISFNFENSGYFQVEVTPTNRTTSTAIMNGYIIGTSTSIVGQPAIATGTLRVPVQCKNTDFTLDIKSSSHLPMYIAGAEVEGYYHNRARRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90824,50670 Da
isoelectric point:4,87857
aromaticity:0,10723
hydropathy:-0,30253

Domains

Domains [InterPro]
IPR058003
TTP
3–830
IPR058003
AXH71551.1
1 830
Architecture
TTP
TTP 3-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71551.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,7961
Central domain 169 367 200 0,5410
C-terminal 368 830 462 0,4062
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-367
C-terminal
368-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC201P
[NCBI] 		2283024 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71551.1 [NCBI]
Genbank nucleotide accession
MH598802 [NCBI]
CDS location
range 21919 -> 24411
strand +
CDS
ATGGGAAGTGTTGTTTCACAATCTATTCCTAACTTCTTAAATGGCATGTCTCAACAGACACCAACACAAAGAGGTATTAATCAAGGAGAAGACCAAATAAATTTACAAAATGGTTTAGTAGATGGTTTATCAAAAAGACCTCCTTTAGATTATGTAGCAACAGTAGATAATACTAATATTTATTCTAACAAAACAAAATTTTGGCAAATACAAAGAGATGCTGATAATCAATATATTGTAGCGTTATACAATGGAGGTGTAAAAGTATTTGGTTTAGATGGTACAGAAAAAACCGTTACTGTAGCAAGTGGGTCAGGTTATTTAACTTCTACAAACCCTAGAGAAAATTTTAAATTAGTTAACATAGCAGATTACACTTTTGTAGCAAACACAGGAACTACAGTTGTGGCTGATAGCACAACGTCTGCGGCTAAAGTAGAAGAGTTTTTAATTGTTTGTAAATTAACAAACTACGGTAGAGAATACAAAGTTGCATTGAAACACCCATCAATGGCACAAGAGCTAGAAGTTGTTTTTCAGTTACCTTCAGGTAATGATGCGTCAACCGATAGTAAATTTAGAGATACAAATAAAATAACAGATATACTTTTATATGGTACATCAAGTACACATTGGGACAGTGCCGCAAATGGTATTGGATTTAATGTTAGAAGAACAGATACGAATGCGTCTGTGTCTACTACACAAGGTTTAGCAAATTATTCTGGTTTTACATCATATTTTACTTTTGAAGCATACGACAGTGTAATCTATGGAAAGCCTACTGACCAAAATGCTAACTATGAAATAACTACTTCAGATGGTTCTGGTAACACAGCCATGTATTCTATAAGAGATGAAATACAAGATTTTAGTAAATTACCTTTTTATGGAAAAGAAGGAGTAATAATAAAAATTACGGGAGAAGAAGGTGATACACTTTCAGATTACTATGTAAAATTTTCAGGAAAGTCTGGTGTATGGAATGAAACTATTGCACCCGCTACATCTATTGGTTTAAACAATTCTACAATGCCACACGCATTGATTAATAACAATAATGGAACTTTTACATTTCAAGAATTAGATTGGACAGATAGAGTATGTGGAGATGCTGATACAAACCCTGACCCAACTTTTGTTGGTAAAAAAATAAATAACTTAACTTATTATAAAAATAGATTAGGAATATTATCAGGAGAAAATTTAGTATTAACAGAAAATGCTTCTTTCTTTAATTATTTTGCTACAACATCAACACAAGTTTTAGATACTGACCCAATTGATATTGCGGCTTCAGGTACACAAGTTAATACATTAAAAAACTCTGTAGGATTTAATGAAAGTTTATTATTATTTTCTGATACTGCACAATACAAACTAGATAGTTCAGGTGAAACAATTTCACCAACTTCAGCAATACTTAATCAAGTATCTTCATTTGAACATGATGATAAAGTTACACCAGTATCAGCAGGTAAGTTTGCATATTTTGCACAAGCAAGAACAAACAACACTGCAATAAGAGAATACTTTGCAGATGATGATACCTTAACAAATGACGGCTTAGATATAAGTGTATCAGTACAAAATTTAATACCATCTAATTGCTATCAAATTATTAGTAACACTACTGAAGACACCCTAATATTTTTAACTTCAGATACAGCAGATACACAGACAGCTCCATATAGCGGAACAGTGTCTACAACATACGCTAACACAATGTATATCTATAAGTATTTCTTTGATGGTGGAGAGAAAGTTCAAAACGCATGGTCTAAATGGACATTTGAAGGTGTAAAAATTATTGGTGCTATGTCATTAGAAAGTTTTATTTATGTCTTAGCTTCAGAAGGCACTACTACAAAATTATTAAAAATAGATTTAAGAAATTTAAAAGATACAACAATAGGGCATGGAGTTTACATTGACCTTAAAACTTCTGTTACAGGAACGTATGATAGTGCTACCGATTTAACCACATTCGTGTCACCTTATGGTGTGAAAACAGGTTTAATTGCAGTAGATAGAACTAACGGCAATAACTATGTTGTAACTAATACTTCAGGTTCAACTTATACTATTGCAGGAAACCACACAGCATTGTTCATAGGCATTCCGTATGAAAGTAAGTACACAATGTCTACTCAGTATGTAAGAGAAAATACAGGAAGAGGTTTAGTTGCTGTAACGTCAGGTAGATACCAAATAAGAAACATATCATTTAATTTTGAAAATAGTGGATACTTTCAAGTTGAAGTTACTCCTACTAATAGAACTACATCTACAGCTATTATGAATGGTTATATTATTGGAACTTCTACATCTATAGTTGGACAACCTGCTATTGCTACAGGAACTTTAAGAGTGCCTGTTCAATGTAAAAACACAGACTTTACTTTAGATATTAAATCTTCATCTCACTTGCCTATGTATATCGCAGGGGCAGAAGTTGAAGGATATTATCATAACAGAGCAAGAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61604e70e7f119ce997d5be5f88f24b7c4cb3cd7f8556555f51053e08dd6b38e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50