Protein

View in Explore
Genbank accession
WZP32768.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPGSHGALSWGGHPAGCLAILRSPAAIPTAARRSWARLLNPYQSLTNKGIIMKLNITAPGVFFNRGGDRVTVDQIVLTNSAGAVVTFPVKGRVWKMYRGAYRPREFKIWTAAGKFYAGEQSRSPWDIVGEVIADDVRPVYWQDLTDDQKATAAAKYHNGEGTPEDYFTYTPDQFIVINGDVYDLDADAAVYEIEGLKGHVRILESTKADGAALAVQCVEGWDVVSVYRVKVTP
Physico‐chemical
properties
protein length:233 AA
molecular weight: 25535,64720 Da
isoelectric point:6,90494
aromaticity:0,10730
hydropathy:-0,17082

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SAL_R1
[NCBI] 		3134920 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZP32768.1 [NCBI]
Genbank nucleotide accession
PP504835.1 [NCBI]
CDS location
range 10776 -> 11477
strand +
CDS
ATGCCGGGATCACACGGCGCTTTATCGTGGGGCGGTCATCCGGCTGGATGCCTTGCCATATTGAGATCGCCCGCCGCGATTCCAACGGCGGCCCGTCGGTCATGGGCGCGCCTTTTAAATCCGTATCAGTCATTAACTAATAAGGGGATCATCATGAAATTAAATATCACCGCGCCGGGCGTTTTCTTCAATCGTGGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTAACGAATAGCGCCGGGGCCGTCGTTACATTCCCGGTTAAGGGGCGGGTCTGGAAAATGTACCGGGGCGCATACCGTCCGCGCGAGTTTAAGATCTGGACGGCGGCGGGCAAGTTTTACGCGGGCGAACAATCCCGATCGCCGTGGGATATTGTCGGCGAAGTTATCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGACGGCGGCGGCCAAATATCACAACGGCGAAGGCACGCCGGAAGATTATTTCACCTATACGCCGGATCAATTCATTGTGATTAATGGTGATGTGTACGATCTGGACGCCGACGCGGCCGTTTATGAGATCGAAGGCTTAAAAGGTCATGTGCGCATACTGGAAAGCACGAAGGCGGACGGGGCCGCGCTGGCGGTGCAATGCGTCGAAGGTTGGGACGTGGTAAGCGTTTACCGCGTAAAGGTGACACCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c0b3124f28dff144f178905251e3dd34257cc673dfaf3b4135a9c4bd542af17e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6543
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Introducing a Breakthrough in Combatting Typhoid fever: Discovery of a Salmonella Typhi Phage SAL_R1 for diagnosis and therapy Sultana,M., Hossain,M.A., Hassan,M.H., Rahman,M.A., Hossain,A., Rahman,A. and Afrin,S. 2016-11-03 — GenBank