Protein

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Genbank accession

XNT20181.1 [GenBank]

Protein name

variable tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,89

Evidence RBPdetect2

Probability 0,65

Protein sequence

MTTNTPKYGGLLTDIGAAALAAASAAGKKWQPTHMLIGDAGGAPGDTPDPLPSAAQKSLINQRHRAQLNRLFVSDKNANTLVAEVVLPVEVGGFWIREIGLQDADGKFVAVSNCPPSYKAAMESGSARTQTIRVNIALSGLENVQLLIDNGIIYATQDWVKEKVAADFKGRKILAGNGLVGGGDLSADRSIGLAPSGVTAGSYRSVTVNANGVVTQGSNPSTLAGYAIGDAYTKADTDGKLAQKANKATTLAGYGITDALRVDGNAVSSSRLAAPRSLAASGDASWSVTFDGSANVSAPLSLSATGVAAGSYPKVTVDTKGRVTAGMALAATDIPGLDASKLVSGVLAEQRLPVFARGLATAVSTTSDPNTATVPLMLTNHANGPVAGRYFYIQSMFYPDQNGNASQIATSYNATSEMYVRVSYAANPSARDWLPWKRCDIGGSFSKEADGALGGAVNLNSLITSGWWYQTANAQAESGANYPVPRAGLLQVHNAGTNFIYQTYQVYDGEGFYFRCRYTNTWYPWRRVWHGADFNPNDYLLKSGFTWAALPGKPATFPPTGHNHDAAQITSGILPLARGGLGSNTAAGARNNIGAGVPATANRSLNGWWKDNDTGLIVQWMTVSVGDHPGGIVNRSLTFPIAFPTTCLHVVPSVKELGRPATSASTVTLADVSVSTTGCVIVATEYHGAVQNYAIRLVAIGC

Physico‐chemical properties

protein length:	702 AA
molecular weight:	73273,37660 Da
isoelectric point:	8,77732
aromaticity:	0,08120
hydropathy:	-0,07379

Domains

Domains [InterPro]

IPR051934
Unmapped
1–649

IPR051934

DC_0787
STR
1–678

DC_0787

IPR022225
ATT
7–158

IPR022225 cd19958 cd19958 G3DSA:2.60.40.3940

IPR054075
RBD
613–701

IPR054075

XNT20181.1

1 702

Architecture

ATT

STR

RBD

ATT 1-158 | STR 159-678 | RBD 679-701 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR051934	Unmapped	-	1	649	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
DC_0787	STR	DC_0787	1	678	Novel HMM	DC_0787	Central	Low	Positional only	31 proteins / 31 hits
IPR022225	ATT	DC_0271	7	158	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
cd19958	STR	DC_0464	360	440	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
cd19958	STR	DC_0464	451	529	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
G3DSA:2.60.40.3940	RBD	G3DSA:2.60.40.3940	601	701	Merged direct domain	G3DSA:2.60.40.3940	C-terminal	Low	Positional only	77 proteins / 77 hits
IPR054075	RBD	DC_0717	613	701	InterPro cluster	Putative tail fiber protein gp53-like, C-terminal	C-terminal	Low	Positional only	174 proteins / 174 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage sp. [NCBI]	2729638	Viruses >
Host	Pseudomonas aeruginosa [NCBI]	287	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Genbank protein accession

XNT20181.1 [NCBI]

Genbank nucleotide accession

OQ658366.1 [NCBI]

CDS location

range 10324 -> 12432
strand -

CDS

ATGACGACCAATACTCCGAAATACGGTGGCCTGCTCACCGACATAGGTGCCGCTGCGCTGGCTGCGGCCAGCGCAGCAGGCAAGAAATGGCAGCCGACTCATATGCTGATCGGCGATGCCGGCGGTGCGCCGGGCGACACGCCGGATCCATTGCCTTCTGCGGCGCAGAAGAGCCTGATCAACCAACGCCATCGGGCTCAGCTGAATCGGCTGTTCGTTTCCGACAAGAACGCCAATACCTTGGTTGCCGAGGTGGTGCTGCCAGTTGAGGTAGGTGGCTTCTGGATCCGCGAGATCGGCCTGCAGGATGCCGACGGCAAGTTCGTCGCGGTATCCAACTGCCCGCCCAGCTACAAAGCTGCAATGGAAAGTGGCAGTGCGCGGACCCAGACCATTCGGGTGAACATCGCGCTCTCCGGCCTGGAGAATGTCCAGCTGCTGATCGACAACGGCATCATCTACGCCACTCAGGACTGGGTGAAGGAAAAGGTCGCTGCCGATTTCAAGGGCCGCAAGATTCTGGCTGGCAATGGCCTGGTCGGTGGGGGCGATCTTTCTGCCGACCGCAGCATTGGCCTGGCGCCTTCCGGCGTGACGGCGGGCAGCTATCGCTCGGTCACGGTGAACGCCAACGGGGTGGTCACCCAGGGCAGCAATCCGAGCACCCTGGCCGGCTATGCGATCGGAGATGCCTATACCAAGGCCGATACCGACGGAAAACTGGCGCAGAAAGCGAACAAGGCCACCACCCTGGCCGGCTATGGCATCACCGATGCGCTGCGAGTCGATGGCAACGCCGTGTCATCCAGCAGGCTGGCCGCACCGCGTAGCCTGGCAGCCAGTGGCGATGCCTCCTGGTCGGTGACCTTCGACGGCAGTGCCAATGTTTCTGCGCCGCTGAGTCTTTCCGCTACCGGTGTGGCAGCGGGCAGCTATCCGAAGGTGACCGTGGATACGAAAGGAAGGGTGACTGCTGGAATGGCGCTGGCGGCGACGGACATTCCCGGGCTGGATGCTTCGAAGTTGGTCAGCGGGGTGCTGGCCGAGCAGCGTTTGCCGGTATTCGCGCGCGGGTTGGCTACTGCTGTCTCGACCACTAGCGATCCGAACACCGCGACCGTGCCGTTGATGCTGACCAATCATGCGAACGGACCTGTTGCCGGACGGTACTTCTACATCCAGTCGATGTTCTATCCGGATCAGAACGGCAATGCTTCGCAGATTGCAACGAGCTACAACGCTACATCCGAGATGTATGTACGGGTGTCCTACGCGGCCAACCCTAGCGCCCGGGACTGGCTGCCCTGGAAGCGCTGCGACATAGGTGGTTCGTTCAGCAAGGAGGCGGACGGGGCCTTGGGCGGTGCGGTCAATCTCAACTCGCTGATCACGTCGGGATGGTGGTACCAGACGGCCAATGCACAGGCCGAAAGTGGGGCGAACTACCCGGTCCCCCGGGCCGGCTTGCTTCAAGTGCATAATGCAGGCACCAATTTCATCTACCAGACATACCAGGTTTACGACGGTGAAGGGTTCTATTTTCGTTGCCGCTACACCAACACCTGGTATCCATGGCGGCGTGTATGGCATGGGGCGGACTTCAATCCGAACGACTATCTGCTGAAAAGTGGCTTTACGTGGGCCGCCCTGCCAGGAAAGCCGGCGACCTTTCCGCCTACTGGCCACAACCACGACGCCGCCCAGATCACGTCGGGCATCCTGCCTCTGGCGCGCGGCGGTCTTGGTTCGAATACGGCAGCGGGGGCGCGCAACAATATCGGGGCTGGGGTTCCCGCGACGGCGAACCGATCGCTGAATGGCTGGTGGAAGGATAACGATACAGGACTCATCGTGCAGTGGATGACAGTGAGTGTCGGCGATCATCCGGGTGGAATCGTCAACCGCTCGCTGACCTTTCCGATCGCGTTTCCCACTACCTGCCTGCACGTGGTGCCGAGCGTCAAGGAACTGGGGCGGCCGGCGACGTCGGCATCGACCGTCACCCTCGCAGATGTCAGCGTCAGCACCACGGGGTGTGTGATTGTCGCTACCGAGTATCACGGTGCGGTCCAGAACTATGCGATCAGGCTTGTGGCCATTGGCTGTTGA

Genome Context

Tertiary structure

PDB ID

ef6cf51d743c909928b3c9eac5cf0f2297904842a0eb582ac1a172832bd1f935

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7548

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence