Protein

View in Explore
Genbank accession
QPZ53725.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MIIRNNNNIEKDNMTISSTTVKNSYSGNGTLDTFNYTFKIFADADIQVIIRDASATETVKTLTTHYTVTGAGSASGGTIVFTAGNIPSATETVVIRRASPQTQAIDYIANDPFPAESHEEGLDRSMMAIQQLQEEVDRSIKLSRTNTMTSTEFAVGSTARAGKIFGFDDNGELVVSQELGTFQGNWSASTTFSARDIVKDTSNNNIYLCNTGHTSSGSQPISTNTDVAKWDLLVDAASATNSQNAAAASAAAALVSENNASTSESNALTYKNDAETAKTAAELAETNAETAQTAAEVAQAAAEAALDNFDDRFLGAKASDPTLDNDGNALIDGALYFNTTDDVMKVYDLTNTTWRQIQLTTSDQANVNTVAADLSGANTIGTVAGSIANVNSVSGNATNINTVAGISADVTSVAGISAAVSAVNSNSTNINAVNANSANINTVAANNTNITNVGGSITNVNTVASNLSDVNSFAETYRISSSAPTTSLDIGDLYFDTTADELKVYKSSGWSAAGSSVNGTSARYTYTISGTPSSVSGADDNSLTLAYDAGFADVFVNGVRMSSADITITSGTSVVFASPLTDGDVVDIVAYGTFNVAAIDASNITSGTLDVNRISDGSITNAKLATPFNLTLPTISSISPDTIDNSEATITITGSNFVSVPQVEFLNPSTGIWYRASTITFNNSTSLTVTITLAVDAQYKVRVENPDGLAILSGTILTVSDAPTWNTAAGDLGTFAGNFSGTLATLSATSDSAITYSEVGSNLTTANVTLNTSTGALTTTDFGGTSTTATTYNFTIRATDAENQTADRSFSLTSFYSATGGGQFN
Physico‐chemical
properties
protein length:825 AA
molecular weight: 85386,71660 Da
isoelectric point:4,11193
aromaticity:0,06788
hydropathy:-0,09527

Domains

Domains [InterPro]
DC_0055
ATT
21–130
DC_0055 DC_2093 IPR013783
Coil
Unmapped
115–135
Coil DC_0841
IPR014756
STR
633–710
IPR014756
cd00102
RBD
633–718
cd00102
QPZ53725.1
1 825
Architecture
ATT
STR
ATT 21-130 | STR 162-825
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC204P
[NCBI] 		2796524 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53725.1 [NCBI]
Genbank nucleotide accession
MW273926 [NCBI]
CDS location
range 15276 -> 17753
strand -
CDS
TTGATAATAAGGAACAATAATAATATAGAGAAAGACAATATGACAATATCTAGCACTACAGTAAAAAATTCCTACTCTGGTAATGGTACACTAGATACCTTCAATTATACTTTTAAAATATTTGCAGATGCAGACATTCAAGTTATTATTAGAGATGCTTCAGCAACTGAAACAGTTAAAACTTTAACTACACATTATACTGTAACTGGTGCAGGTTCTGCTTCTGGTGGAACTATTGTATTTACAGCAGGTAACATTCCAAGTGCAACAGAGACAGTTGTAATAAGAAGAGCATCACCACAAACACAAGCAATCGATTATATTGCTAACGATCCTTTCCCTGCTGAATCTCACGAAGAAGGATTAGATAGATCTATGATGGCAATTCAACAATTGCAAGAAGAAGTAGATAGATCAATTAAATTATCAAGAACTAACACAATGACTTCAACAGAGTTTGCTGTAGGTTCAACTGCTAGAGCTGGTAAAATTTTTGGGTTTGATGACAATGGTGAATTAGTTGTATCGCAAGAACTTGGAACTTTTCAAGGTAACTGGTCAGCTTCAACAACTTTTTCTGCTAGAGATATTGTAAAAGATACTTCAAACAATAATATTTATTTATGTAATACTGGTCATACATCATCTGGTAGTCAACCTATTTCAACTAACACAGATGTAGCTAAATGGGATTTATTGGTAGACGCAGCTAGTGCGACAAATTCTCAAAATGCAGCAGCAGCTAGTGCAGCAGCAGCTTTAGTATCAGAAAACAATGCTTCTACTTCAGAAAGCAATGCTTTAACTTACAAAAACGATGCAGAGACAGCAAAAACTGCAGCAGAATTAGCAGAAACAAATGCCGAAACTGCACAGACAGCAGCAGAGGTGGCTCAAGCAGCAGCAGAAGCTGCATTAGATAATTTTGATGACAGATTTTTAGGTGCTAAAGCTAGTGATCCAACTTTAGATAATGATGGTAACGCATTAATAGATGGAGCATTATACTTTAATACTACAGATGATGTAATGAAAGTCTACGACTTGACTAACACTACATGGAGACAAATTCAATTAACTACATCTGACCAGGCAAATGTAAATACTGTAGCTGCAGACTTATCTGGTGCTAACACTATTGGTACTGTTGCAGGTTCTATTGCTAATGTAAATTCAGTTTCAGGAAACGCAACCAACATTAATACAGTTGCTGGAATATCAGCAGATGTAACAAGTGTTGCTGGAATAAGTGCTGCTGTTAGTGCTGTAAATTCTAATTCAACAAACATTAATGCTGTTAATGCTAACTCTGCAAATATTAATACAGTAGCAGCTAACAATACTAATATTACAAATGTAGGTGGTTCAATCACTAATGTAAATACAGTTGCTTCTAATTTATCAGACGTAAATAGTTTTGCAGAAACTTATAGAATTTCATCTTCTGCTCCAACAACTTCTTTAGACATTGGAGATTTATATTTTGATACAACTGCTGATGAATTAAAAGTTTACAAATCTTCTGGATGGAGTGCTGCAGGTTCAAGTGTTAATGGAACTTCAGCAAGATACACTTACACTATATCTGGTACACCTAGTTCAGTATCTGGTGCAGATGACAATAGTTTAACACTTGCTTATGACGCAGGATTTGCAGATGTGTTTGTCAATGGTGTTCGTATGTCTAGTGCAGATATTACAATTACATCTGGTACTTCAGTTGTATTTGCTTCACCTTTAACAGATGGAGATGTAGTTGATATTGTTGCTTATGGAACATTTAATGTAGCAGCTATTGATGCTTCTAATATTACAAGTGGAACTTTAGATGTTAATAGAATTTCAGATGGTTCAATTACTAATGCTAAACTTGCAACACCTTTTAATTTAACATTACCAACTATTAGTTCTATCTCACCAGACACAATAGATAACTCAGAAGCAACAATTACAATAACAGGTTCAAACTTTGTATCAGTACCTCAAGTAGAATTTTTAAATCCTTCAACTGGTATTTGGTACAGAGCTAGTACAATTACATTTAACAATTCAACATCATTAACAGTTACAATTACTTTAGCAGTTGATGCTCAATACAAAGTTAGAGTTGAGAACCCAGATGGTTTAGCAATATTATCTGGAACAATACTTACAGTTTCAGATGCACCAACATGGAATACTGCTGCTGGAGATTTAGGAACTTTTGCAGGAAATTTCTCTGGAACACTTGCAACACTTTCAGCTACATCAGATAGTGCAATAACTTATTCAGAAGTAGGAAGTAATCTTACAACAGCTAATGTTACATTAAATACTTCAACAGGTGCTTTGACTACAACTGACTTTGGTGGTACAAGCACAACAGCAACAACTTACAACTTTACAATAAGAGCAACAGATGCAGAAAACCAAACAGCAGATAGAAGTTTTTCACTTACATCTTTTTATAGTGCAACAGGAGGGGGACAATTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d6585388327a9dcfabe9d6e07c4bb934c08d6b5c22bb1f8f30a603778e3bcd0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3409
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank